Dickeya zeae: W909_10030
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Entry
W909_10030 CDS
T03567
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dzc
Dickeya zeae
Pathway
dzc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
W909_10030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzc03400
]
W909_10030
Enzymes [BR:
dzc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
W909_10030
DNA repair and recombination proteins [BR:
dzc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
W909_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJC66385
LinkDB
All DBs
Position
complement(2219053..2222559)
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AA seq
1168 aa
AA seq
DB search
MNENRLRPGLMAIHSNHPEALRDVLVSWMAANPLSGLENELILVQSNGIGQWLKLALARD
ARDGGCGVAAALDIQLPSRFFWQVYRAVLGREQVPETSPFDKPLLVWRLLRLLPDLLTQP
EFAVLARFLRQDTDLRKHYQLAERLADLFDQYQVYRADWLADWSEGRDVLTSHRRGVEPL
PEEQRWQPLLWRALLADTGEALSGTSRAALHRRFLDEVDRRGDRERPAGLPSRVVVFGIS
SLSQQALELLAAIGRWTQVFMCVHNPCEHYWGNIIADKDLLRAERARQQRKPGMPEVIAL
EELHQHAHPLLAAWGKQGRDYIGLLDEYDQREQYESQLQPVTSRIDLFNSNGEDCLLHQL
QDDIRDLRPLSESRSRWPAIDPDQDGSVRFHLAHSPQREVEVLHDQLLAAFAADPTLRPS
DVIVMVPDINGYAPHIQAVFGLIDRQDPRYIPFSVADRGARQNNLVLAALEKLLHLPQSR
VAVSDVLDLLDVPAVRQRFAIEEEQLPLLQRWIRAANVRWGLHARQRQSLNLPDAPEQNS
WFFGLRRMLLGYAVGAGSAWRDIEPLDEIGGLDAALAGQLAWLLDRLDYSWQQLCQPATP
VQWGERLRVLLSTFFAAEDGEDGFMLLQLDEGLQNWLEACESVALTQELPLSVVREHWLG
LFEQASLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYPRNRVPLDFDLMGQDYRP
GDRSRREDDRYLFLEALLSARERLYISWVGRSIHDNSERPPSVLVAQLRDHLSNGWRTVN
AEEVLPVLTVEHRLQPFSPEYFTAGSSLFSYAREWRAGLPSYDGALSHTAAAPNAVLDDY
VQEGVLTLRQLADFVRDPVRSFFRLRLNVWFEQEDPTSQDQEPFAIDALENWRLQHELIQ
VQKAALQRQIPREQALAEHLQRIARRGELAPGGFTTVLEQDLAEPMADLFTRYQQERDKW
PTAIPDEALSLPELPLEDWLNELRRDEQGNRCRLVLESGGLLHPTRRSYRLDKLLPFWVA
HLAGHLGGQALHSTLVSKNGTVHLPALEPAQAAVYWQSLLDAWRQGMRCPLPVAVKTGFR
WLEVGGEPGQSAEGEAGKAARQCYEEHDPANRKYAESASNPYLARAFPTFEQLWADGEFA
RWVQQLLAPLHHTLKAASARNKKSGGQP
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacaggctacgacccggtttgatggcgatccacagcaaccatcctgaagcg
ctgcgtgacgtgctggtctcgtggatggcggccaacccgctgtccgggctggaaaacgaa
ctgattctggtgcaaagcaacggtatcgggcagtggctgaaactggcgctggcgcgcgat
gcccgcgatggcgggtgtggtgtggctgccgcgctggatattcagttaccgtcacgtttt
ttctggcaggtttaccgtgcggtgctgggccgtgagcaggtaccggaaacctctcccttt
gataaaccgttgttggtctggcggctgctacgcctgttgccggacctgctgacacagccc
gaatttgccgtgctggcgcgttttttgcgacaggataccgatttgcgaaaacactaccag
ttggccgaacggctggctgacctgttcgaccaatatcaggtgtatcgcgctgactggctg
gccgactggagcgaggggcgggatgtgctgaccagccaccgacgcggtgtggagccgctg
ccagaggagcagcgctggcaaccgttgctgtggcgggcactgctggcggataccggcgag
gcgctgtccggcaccagtcgcgcggcgctgcaccgacgttttctggacgaggtcgaccgg
cgaggtgaccgtgaacgtccggccggtttaccgtcgcgtgttgtcgtgtttggtatttcg
tcgttatcgcaacaggcactggaactgctggcggctatcgggcgttggacccaggtgttc
atgtgcgtgcataacccgtgcgaacattactggggcaacattattgccgataaagacctg
ttacgtgctgaacgcgcccgtcagcagcgaaaacccggtatgccagaggtaattgcgctg
gaggagttacatcagcatgcccacccgctgctggcggcatggggcaaacaagggcgcgac
tacatcgggttgcttgatgagtacgaccagcgcgagcaatatgaatctcaactgcaaccg
gttacctcacgtattgatctgtttaacagcaacggcgaagactgcctgctgcatcagcta
caggacgacattcgggatttgcgcccgttgtcggaaagccggtcgcgctggcccgccatc
gaccccgatcaggacggttctgtccggtttcatctggcgcacagcccgcagcgtgaagtc
gaagtgctgcatgaccaactgctggcggcgtttgccgccgacccgacactgcgcccgagc
gatgtgattgtgatggtgccggacatcaacggctatgcgccgcatattcaggcagtgttc
gggttgatagaccggcaggacccgcgttacatcccattcagtgtggcggatcgcggtgca
cggcagaacaacctggtgctggcagcgctggaaaaactgttgcacctgccgcagtcgcgt
gtggcggtcagcgatgtgctggatctactggacgtaccggcggtgcgccagcgttttgcc
attgaagaagagcagctaccgttattgcagcggtggattcgggcggccaacgtgcgctgg
gggttgcatgcgcgccaacgccaaagtcttaacctgccggatgcgccggaacagaacagc
tggtttttcggcctgcgccgtatgctgctggggtatgcggtgggcgcaggtagtgcctgg
cgggatatcgaaccgctggatgaaatcggtgggctggatgctgcgctggccggacaactg
gcgtggttgctcgaccggctcgattacagctggcagcagctttgtcagcctgcgacgccg
gtgcagtggggcgagcgattacgtgtactgttgagcacgttttttgcggcagaggatggc
gaggatggcttcatgctactgcaactggacgaagggttgcagaactggctggaggcgtgc
gaatcggtcgcgttgacgcaggaactgccgttatcggtggtccgggaacactggctggga
ttatttgaacaggcgagcctgacccagccgtttttcgccggggccgttaccttcgccaca
ttgatgccgatgcgcgctatcccattccgccatgtgtgcctgctgggcatgaatgacggt
gattacccccgcaaccgggtgccactggacttcgacctgatggggcaggattaccgcccc
ggcgaccgttcccgtcgtgaagatgaccgttacctgtttctggaggcgttgctgtcagcg
cgtgagcggctgtatatcagttgggttgggcgcagcatccacgataacagcgagcgtcca
ccctcggtgctggtcgcgcaactgcgcgaccacctcagcaacggctggcggacggttaac
gcagaggaggtattgcccgtgttaacagtagaacaccggttgcaacctttcagcccggag
tattttaccgcgggcagttcgctgttcagttatgcccgtgaatggcgtgccgggttgccg
tcatacgatggcgcgttatcgcacacggctgccgccccgaatgccgtgttagatgattat
gtgcaggagggggtactgacgttgcgtcaactggccgattttgtgcgtgacccggtgcgt
agcttctttcgtttacggctcaacgtctggtttgagcaggaagaccccaccagccaggat
caggaaccgtttgctatcgatgcactggaaaactggcgtctgcaacatgagctgattcag
gtacaaaaagccgcgttgcagcggcagattccccgcgagcaggcgctggctgagcatttg
cagcgtatcgcccggcgtggtgaactggcacccggcggtttcaccacggtactggagcag
gatttggcagagcccatggcagacctgtttacccgttaccaacaggagcgagataaatgg
ccgacagcgataccggacgaagcgctgtcgttgccagagttaccgctggaagactggcta
aacgaactgcgccgtgacgaacagggcaaccgctgtcggctggtgctggaaagtggtggg
ttgctccatcccacccgtcgcagttaccgactggataaactgttgccgttctgggtcgcg
catctggccgggcacctcggcgggcaagcgttacacagcacgctggtcagcaaaaacggt
accgttcatctgcctgcactggagcctgcgcaggcggcggtttactggcagtctctgctg
gatgcctggcggcagggcatgcgttgcccgttgcccgtcgcggtgaaaaccgggtttcgc
tggctggaagtcggtggtgagccggggcaatcggctgagggtgaagcagggaaagcggca
cgccagtgctatgaggagcatgatcctgctaaccgcaaatatgctgaatcagcgtctaac
ccttatctggcgcgggctttcccgacgttcgaacagctgtgggccgacggcgaatttgcc
cgctgggtacagcagttgctggcaccgctacaccacacactgaaagccgcatcggcgaga
aataaaaaatcagggggccagccatga
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