Dickeya chrysanthemi: Dd1591_1034
Help
Entry
Dd1591_1034 CDS
T00930
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dze
Dickeya chrysanthemi
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dze03016
]
Dd1591_1034
Enzymes [BR:
dze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Dd1591_1034
Transfer RNA biogenesis [BR:
dze03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Dd1591_1034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACT05906
UniProt:
C6CNI5
LinkDB
All DBs
Position
complement(1188524..1189057)
Genome browser
AA seq
177 aa
AA seq
DB search
MTPTRRLFFALSLPDDIGRQIVHWRAAQFSPEAGRPVAAANLHLTLAFLGEISDAKMQAL
TALAGRIRQSAFTLNLNDAGHWPRPGVVWLGCRQAPRGLLQLADMLRSQAARNGCYQPPQ
PFHPHITLLRGATRPVPLPAATFNWTVSVEQFFLYESRTEAGRTHYQPIAHWPLPTL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgacccgccgcctgtttttcgccctgtcgctgcccgatgatatcggccggcag
atagtacactggcgcgccgcgcaattctccccggaagccgggcgcccggtcgcggcggcc
aacctgcatttgacgctggctttcctcggcgagatcagtgatgccaaaatgcaggcgtta
accgcgctggccgggcgtatccgtcagtcggcgttcaccctgaatctgaacgatgccggc
cactggccgcgccccggcgtggtatggctcggttgccgccaggcgccgcgcggcttattg
caactggctgatatgctgcgttcgcaagcggcgcgcaacggttgctaccaaccgcctcag
cctttccacccgcacatcacgctactgcgcggcgctacccgcccggtgccgctgcccgcc
gccacgttcaactggacggtgagcgtcgagcaattttttctgtatgaatcgcgcaccgaa
gcaggccgaacccattatcagcctatcgcccactggccgttgccaacactctga
DBGET
integrated database retrieval system
