Durio zibethinus (durian): 111275351
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Entry
111275351 CDS
T05242
Name
(RefSeq) carbon catabolite repressor protein 4 homolog 4-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111275351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111275351
Enzymes [BR:
dzi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111275351
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111275351
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111275351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
111275351
NCBI-ProteinID:
XP_022716416
UniProt:
A0A6P5WLT6
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MLIKTRSLALTPCLPVHTIIGSVSSKLKMDRSGKMSTRTSTGGSSSSKAAPTMREFVRVD
GGAGTRSQPEVIKFRLVSYNILAQVYVKSSLFPHSPSPCLRWKARSQAILTLLKNLGADF
FCLQEVDEYDSFYKRNMEDHGYSSIYVQRSGQKRDGCGIFYKNNCAEFLSKETIEYNDLV
DVIQGETSLSADKQNETLTNTNNGAGPKNVHCLDDLLSDSSVKEHHGDPNDPRVRLKRDC
VGIMAAFKLKDPFHHVVILANTHLYWDPEWADVKLAQAKYLLSRLAQFKTLVTDKFECTP
SLILSGDFNSTPGDKVYRYLISGNSLSTSSVRCLEELPLPLCSVHAFTRGEPPFTNCTPD
FTNTLDYIFFSPSDCLKPVSILELPVLDSPDITGGLPNYSHPSDHLPIGAEFVITKD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaagaccaggagtttagctttaactccttgcctacccgttcataccatcatc
ggcagtgtcagtagtaaattgaaaatggacagaagcggcaaaatgagtacgaggacaagc
acgggaggaagtagcagcagcaaggcagcaccaacaatgcgggaatttgttagggtggac
ggcggtgccggtaccagaagccaacctgaagttatcaaattccgtcttgtatcatacaac
attttggctcaggtgtacgtcaagagctctctgtttccgcattctccgtctccttgtctc
agatggaaggctcgttcacaagcaattttaactcttcttaaaaaccttggagctgacttc
ttttgccttcaggaagtagatgagtatgattccttttataaaagaaatatggaggaccat
ggatattctagtatatatgttcagagaagtggacagaagcgtgatgggtgtggaatattt
tataagaacaactgtgcagaattcctttcaaaggaaacaatagaatacaatgatcttgta
gacgtgatacagggtgaaacctccttatctgctgacaagcagaatgagacactgaccaat
acaaataatggtgctggtccaaagaatgttcactgcttggatgatctgttatcagattct
tctgttaaagagcatcatggagatcccaatgatccacgtgtaagattaaaacgagattgt
gtaggaataatggctgcctttaaactcaaggatccttttcatcatgttgttattctggcc
aacacacatctttattgggatccagagtgggctgatgttaagcttgcccaagccaaatat
cttttatcacgcttagctcagtttaaaacactggtaacagacaaatttgaatgtactcca
tcattaattttgtctggtgacttcaattcaactcccggcgataaggtttatcggtatctt
atttctggcaactctttgtcaacatcatcagttagatgtttggaagaacttccccttccc
ttgtgcagtgttcatgctttcacaagaggagaaccaccatttacaaactgcaccccggac
ttcacaaatacgcttgactacattttcttttccccatctgactgcctaaaacctgttagt
attctcgaacttccagtgttggattcacctgatattactggtggattgccaaactatagc
cacccgagtgatcatctgccaataggtgctgaatttgtaattactaaagactaa
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