Durio zibethinus (durian): 111310279
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Entry
111310279 CDS
T05242
Name
(RefSeq) carbon catabolite repressor protein 4 homolog 4-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111310279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111310279
Enzymes [BR:
dzi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111310279
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111310279
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111310279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
111310279
NCBI-ProteinID:
XP_022765315
UniProt:
A0A6P6AKH7
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDRSGKMSMRTSTGGSSSSKAVPIMREFVRIDSSASARSQHDVIKFRLVSYNILAQVYIK
RSLFLHSPFPCLRWNTRSQAILTLLKNLGADFFCLQEVDEYDSFYKRKSEEHGYSSIYVQ
RGGQRHDGCGIFYKNNCAELLSKETIEYNDLVDLLQGETSLSANKQNETMTNTNNGADPK
NDSSVRSSPAHHGDPNDQRVRLKQDCVGIMAAFKLKDPFDHVIILATTHLYWDPKLADVK
LAQAKYLLSRLAQFKTLVTDKFECTPSLILSGDFNSTPRDKVYQYLISGNSSTSSIGCLE
EPPLSLCSVHAFTRGEPPFTNCTPNFTNTLDYIFFSPSDCLKPVSILELPVLDSPDITGG
LPNYSHPSDHLPIGAEFEITKD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagaagtggcaaaatgagtatgaggacaagcacgggaggaagtagcagcagcaag
gcagtaccaataatgcgggaatttgttaggatagacagtagtgccagtgccagaagccaa
catgatgttatcaaattccgtcttgtatcatacaacattttggctcaggtgtacatcaag
aggtctctgtttctgcattctccgtttccttgtctcagatggaacactcgttcacaggca
attttaactcttctaaaaaaccttggagctgacttcttttgccttcaggaagtagatgag
tatgattccttttataaaagaaagtctgaggaacatggatattctagtatatacgttcag
agaggtggacagaggcatgatgggtgtggaatattttataagaacaactgtgcagaatta
ctttcgaaggaaacaatagaatacaatgatcttgtagacttgttacagggtgaaacctcc
ttatctgctaacaagcagaatgagacaatgaccaatacaaataatggtgctgatccaaag
aatgattcttctgttaggagtagtccagcgcatcatggagatcccaatgatcaacgtgta
agattaaaacaagattgtgtaggaattatggctgcctttaaactcaaagatccttttgat
catgtcattattctggcaaccacacatctttattgggatccaaagttagctgatgttaag
cttgcccaagccaaatatcttttatcacgcttagctcagtttaaaacattggtaacagac
aaatttgaatgtactccttcattaattttgtctggtgacttcaattcaactcccagagat
aaggtttatcagtatcttatttctggcaactcgtcaacatcatcaattggatgtttggaa
gaacctcccctttccttgtgcagtgttcatgctttcacaagaggagaaccaccatttaca
aactgcaccccgaacttcacaaatacgcttgactacattttcttttccccatctgactgc
ctaaaacctgttagtattctcgaacttccagtgttggattcgcctgatattaccggtgga
ttgccaaactatagccacccgagtgatcatctgccaataggtgctgaatttgaaattact
aaagattaa
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