Escherichia coli ABU 83972: ECABU_c22110
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Entry
ECABU_c22110 CDS
T01995
Symbol
rcsA
Name
(GenBank) colanic acid capsular biosynthesis activation protein A
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
eab
Escherichia coli ABU 83972
Pathway
eab02020
Two-component system
eab02024
Quorum sensing
eab02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECABU_c22110 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECABU_c22110 (rcsA)
02026 Biofilm formation - Escherichia coli
ECABU_c22110 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eab03000
]
ECABU_c22110 (rcsA)
Transcription factors [BR:
eab03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
ECABU_c22110 (rcsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Motif
Other DBs
NCBI-ProteinID:
ADN46739
LinkDB
All DBs
Position
2173647..2174270
Genome browser
AA seq
207 aa
AA seq
DB search
MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH
DASNSQRIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI
LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttatgtagttacacccgactaggtttaaccgggtatctg
ttgagtagaggggttaaaaaaagagaaatcaacgacattgaaaccgttgatgaccttgcc
atagcttgtgattcacagcgcccttcagtggtgtttattaatgaggactgtttcatccac
gatgcttctaacagtcagcgcatcaagcacatcattaatcaacatcccaatacgttattt
atcgtttttatggcaattgccaatgttcattttgatgaatatctattggtcagaaaaaat
ttattgatcagttctaaatcgattaaaccggaatctctcgacgatatccttggcgatatt
ctgaaaaaagagacaacgataacctcgtttttaaatatgccgacgttatcattgagccga
accgaatcgagtatgttgcgaatgtggatggcaggtcagggaaccattcaaatctccgac
caaatgaatatcaaagccaagaccgtttcatcgcataaaggtaatattaaacgtaagatc
aaaacgcataataaacaggttatctaccatgtcgtccgactgacggataatgtgactaat
ggtatttttgtcaacatgcgctaa
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