Peptoclostridium acidaminophilum: EAL2_c01950
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Entry
EAL2_c01950 CDS
T03061
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
eac
Peptoclostridium acidaminophilum
Pathway
eac03030
DNA replication
eac03430
Mismatch repair
eac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAL2_c01950 (holB)
03430 Mismatch repair
EAL2_c01950 (holB)
03440 Homologous recombination
EAL2_c01950 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eac03032
]
EAL2_c01950 (holB)
03400 DNA repair and recombination proteins [BR:
eac03400
]
EAL2_c01950 (holB)
Enzymes [BR:
eac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAL2_c01950 (holB)
DNA replication proteins [BR:
eac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAL2_c01950 (holB)
DNA repair and recombination proteins [BR:
eac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAL2_c01950 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
AAA_14
AAA_22
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AHM55528
UniProt:
W8TCJ2
LinkDB
All DBs
Position
162850..163791
Genome browser
AA seq
313 aa
AA seq
DB search
MSFDTILGQETAKRFIINSVEKGRISHAYLFEGPSGIGKKTFALEYARLLLEGKEPGNSP
DFCMLEPDGASFKIAQIRSLCQDILIRPYGKRKVYLLDEADKMTIQAQNSLLKSLEEPPE
YAVIILLCKNSSVLLPTVASRCELVRFFPLSQKQVQGYLVESKQLSCERAHAIAAFSNGI
LSRALNLIESQEFSDFREKTERLIETLLAGNTVNIFSLSSFFESNKDGADEILDIIATYF
RDMALIKMDCDKDFIINLDRRDFIDSVGDKFSTGQILRIIEELDNCKKRLRSNCNLAISV
QAMLLNIQEVIRW
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgatactattttgggtcaggaaactgccaagaggtttataataaattcggtt
gaaaaaggcaggattagccatgcatatctatttgaaggcccatcggggataggaaagaag
acatttgccctggagtacgccaggctgctgctcgaaggcaaggagcctggcaatagcccg
gacttttgcatgctagagcctgacggggcgtccttcaagatagctcagataaggagcctg
tgccaggacatacttataaggccgtatgggaaaagaaaggtgtatttgcttgatgaggca
gacaagatgacaattcaggcgcaaaacagccttttgaagtctcttgaagagcctcctgaa
tacgcagttataatattgctgtgcaaaaactcgtcggtgctgctgcctacagtggcttcg
cgatgcgaacttgtgagattttttcctctctcacaaaagcaggtgcagggatatctggtt
gaatccaagcagctctcctgcgagagagctcatgcaatagcggcgttttcaaacgggatt
ctttcaagggctctcaacctcatagagtcacaggaattttcggatttcagggaaaagaca
gaacggctcatagaaacattactggcagggaatacggtcaatatattttcgctctcatca
ttttttgaaagcaacaaagacggtgcagacgagatactagacataatagccacatatttc
agagatatggcacttataaagatggattgcgacaaagatttcataataaatctcgacaga
cgagattttatcgacagcgtgggggacaaattttcaacaggtcagatacttcgaataata
gaagaattggacaactgtaaaaagaggcttaggagtaactgcaaccttgccattagtgtc
caggccatgcttttaaatatacaagaggtgataagatggtaa
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