Equus asinus (ass): 106839301
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Entry
106839301 CDS
T04645
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eai04121
]
106839301 (TRIM56)
Enzymes [BR:
eai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106839301 (TRIM56)
Ubiquitin system [BR:
eai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106839301 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
106839301
NCBI-ProteinID:
XP_014709417
LinkDB
All DBs
Position
14:29548472..29558642
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AA seq
771 aa
AA seq
DB search
MVSQGSAPSLLEALNSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLAEDGHLRCPECR
ETVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLRAGKPACALCPLMGGASAGGPATARC
LDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNNLAELEASRMTEKEA
LARLREQAARVGTQVEEAAEAVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELEGREQ
VAREAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWMPGPTPCLLPQLELHPGLLD
KNCHLLRLSFEEQQSQKDGGKDGAGTKGCDKTQSWREDGTQTEKHGGIQPQSRDGAQTPK
EDRAQTPQEDGAQTPKAEIAKTPQEDGTQTPKEARAQTPQEEGGALTPRGGRSNKKKKFK
GRLKSVSREPSPAPGPHLEGSGLLPRPVFSCSFPTRMPGDKRSPRITGLCPFGPREILVA
DEQNRALKRFSLNGDYKGAVPVPEGCSPCSVAALQGAVAFSASARLYLISPDGEVQWRRA
LSLSQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSP
EGNFVGSDWQQNSVVVCDGLGQVVGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVI
LDPKGSLLGDFLTAYHGLEKPRVTTMVDGRYLVVSLSNGTIHVFRVRSPDS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccaggggtctgcgccctccctgctggaggccctgaacagcgacttcctggcc
tgtaagatctgcctggagcagctgcgggctcccaaaacattgccctgcctgcacacctac
tgccaggactgcctggcccagctggcggaagacggccacctccgatgccccgagtgccgt
gagacggtgcccgtgccaccggccggcgtggctgccttcaagaccaacttctttgtcaac
gggctcctggatctggtgagggcccgggccggtggagacctgcgcgctgggaagccagcc
tgtgcgctgtgccccctgatgggtggggccagtgccggggggccggccactgcccggtgc
ctggactgtgctgacgacttgtgccaggcctgtgccgacgggcaccgctgcacccggcag
acccacacccaccgagtggtggacctggtgggctacagggcagggtggtacgacgaggag
gcccgggagcgccaggcggcccagtgtccccagcaccccggggaggccctgcgcttcctg
tgccagccctgctcccagctgctgtgccgggagtgccgcctggacccccacctggaccac
ccctgcctgcccctggccgaggctgtgcgtgcccggaggccaggccttgaggagctcctg
gcaggcgtggacaacaacctggcagagctggaggccagccggatgacggaaaaggaagcc
ttggcccggctgcgggagcaggcagccagggtggggacacaggtggaggaggcagcggag
gcggtcctccgggcccttctggcccagaagcaggaggtgcttgggcagctacgggcccac
gtggaggctgctgaggaggctgctcgagagaggctgggggagctggagggccgagagcag
gtagccagggaggcggctgccttcgcgcgtcgcgtgctcagcctaggtcgtgaggccgag
atactctccctggagggggccattgctcagaggctccggcagctgcaggggtgtccctgg
atgcctgggcccaccccctgcctgctgccccagctggagctccatcctgggctcctggac
aagaactgccacctgctacggctctcctttgaggaacagcagtcccagaaggatggtggg
aaagatggagctggaaccaaaggatgtgacaagacccagagctggagagaggatggcacc
cagacagagaaacacggtgggatccagccccagagtagggatggagcccagaccccaaag
gaggacagagcccagacgccccaagaagatggagcccagaccccaaaggcagagatagcc
aagacaccccaagaagatggaacccagaccccaaaagaggccagagcccagacaccccaa
gaagaaggaggagccctgaccccgaggggtggcagatccaacaagaagaagaaattcaaa
ggcaggctcaagtcagtttcccgggagcccagcccagcccctgggccacacctggagggc
tcgggcctcctccccaggcctgtcttttcctgcagtttccccacgcgaatgcctggagac
aaacggtctccccggatcactggactctgtccctttggtccccgggagatcctggtggcg
gatgagcagaacagggcgctgaagcgtttctccctcaacggagactacaagggcgccgtg
cccgtccccgagggctgctccccgtgcagcgtggctgccctgcagggcgcagttgccttc
tcagccagtgcgcggctctaccttatcagcccagatggtgaggtgcagtggcgccgggcc
ctgagcctctcccaggccagccacgctgtggctgcgatgccgagcggggaccgggtggcc
gtcagcgtgtcaggccacgtggaggtgtacaacatggaaggcagcctggctacccggttt
attcctgggggcaaggccaaccggggcctgcgggcactggtgttcctgacaaccagcccg
gagggcaattttgtggggtcagattggcagcagaatagcgtggtggtctgtgatgggctg
gggcaagtggtcggggagtaccgggggccaggcctgcacggctgccagccgggctccgtg
tctgtggacaagaagggctatatcttcctgacccttcgcgaggtcaacaaggtggtgatc
ctggacccaaaggggtcactactcggcgacttcctgacagcctatcatggcctggaaaag
ccccgggtgaccaccatggtggacggcaggtacctggtcgtgtccctcagtaacgggacc
atccacgtctttcgggtccgctctcctgacagttaa
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