Erwinia amylovora CFBP1430: EAMY_3167
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Entry
EAMY_3167 CDS
T01197
Symbol
yjeR
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eam03019
]
EAMY_3167 (yjeR)
03009 Ribosome biogenesis [BR:
eam03009
]
EAMY_3167 (yjeR)
Messenger RNA biogenesis [BR:
eam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAMY_3167 (yjeR)
Ribosome biogenesis [BR:
eam03009
]
Eukaryotic type
Pre-60S particles
RNases
EAMY_3167 (yjeR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CBA23161
UniProt:
D4I1I8
LinkDB
All DBs
Position
complement(3255006..3255587)
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AA seq
193 aa
AA seq
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MPPRRTMTANANNLIWIDLEMTGLDPERDRIIEIATLVTDADLNILAEGPVFAVHQSDAQ
LGLMDEWNVRTHTNSGLVERVKASQVDDRAAELATIEFLQQWVPANSSPICGNSIGQDRR
FLFKYMPQLEAYFHYRYLDVSTLKELARRWKPDILAGFKKQGTHQALDDIRESVAELAYY
REHFIQLAPPQAG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgagacgcactatgacagcaaatgctaataacctgatttggattgatcttgaa
atgaccgggctggacccggaacgggaccgtattattgaaatcgccacgctggtgaccgat
gccgatctgaatatccttgctgaaggaccggtatttgccgtacatcagtccgatgcgcag
ctggggctgatggacgagtggaacgtgcgtacccataccaatagcgggctggtggagcgg
gtaaaggccagccaggtcgatgaccgtgccgccgagctggcaaccattgaatttctgcaa
cagtgggtgcctgctaacagttcacccatttgtggcaacagcatcggccaggatcgccgc
tttctgtttaaatatatgccgcagctggaagcgtatttccactaccgttacctggatgtc
agcacgttaaaagagctggcgcgccgctggaagccggatatcctggcgggctttaagaag
cagggcactcatcaggcgctggatgacattcgggagtcggtggcggagctggcttactac
cgcgaacactttattcagctggcgccgccgcaggccggttaa
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