Enterobacter soli: Entas_1618
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Entry
Entas_1618 CDS
T01604
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
eas
Enterobacter soli
Pathway
eas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Entas_1618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eas03019
]
Entas_1618
03009 Ribosome biogenesis [BR:
eas03009
]
Entas_1618
Enzymes [BR:
eas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Entas_1618
Messenger RNA biogenesis [BR:
eas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Entas_1618
Ribosome biogenesis [BR:
eas03009
]
Prokaryotic type
rRNA processing factors
Entas_1618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
AEN64360
LinkDB
All DBs
Position
complement(1756452..1759568)
Genome browser
AA seq
1038 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFTSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIEARQGGVRCIIVPNDQMQ
TPHYHVLRVRKGEETSTLSYLLPKLHEEEMALPSDEEPAERKLPEQPALATFIMPEAPPE
AALEKPAAKPAVQKPAPEAAKAQPAQPGLLGRFFGALKKMFAGEEAQPEQPQEAPKEAKP
ERQQDRRKRQNNRRDRNDRNDRSDRNERRDNRSDNNEGREQREDNRRNRREKQQQNVEDR
EIRQQAGDESEKSKQRDEQQPRRERNRRRNDDKRQAQQEVKNLNREAPVEQQETEQEERT
QVMPRRKQRQLAQKVRFASEQTEETAIVATETVAEIAPNTQLAKVDLPAVVDNSAEQDEN
SEGRDNAGMPRRSRRSPRHLRVSGQRRRRYRDERYPGQSPMPLAVACASPEMASGKVWIR
YPVARPEQLVEEAVVAEEIVAPVEAVKEVVTEAATIVEPQAVESAPHAVAVETTHPEVIA
APVADAVHIIAEEDTVVAEQVAEEVEPAAPVEEIVEAVAEDVVTEAPVAVEVNAEPAPVV
AEAIAPEVKPEPVVEAAARAHVATAPMTRAPAPEYVPEAPRQSDWVRPNFNFDGKGSAGG
HSATHQATAPATRPQSVE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaacgcaactcagcaagaagagttgcgtgtcgcccttgtggat
gggcagcgcctgtacgatctggatatcgaaagtcctggacacgaacagaaaaaagcgaac
atttacaaaggcaaaatcacccgcattgaaccaagccttgaagctgcattcgtcgattac
ggcgctgagcgtcacggtttccttcctcttaaagaaattgctcgcgaatacttccctgcc
aactataactcccacggtcgcccgaacatcaaagatgtgctgcgcgaaggacaggaagtt
attgttcagattgataaagaagaacgcggcaataaaggcgctgcgctgaccacctttatc
agcctggcaggaagctatctggtactgatgccaaacaacccgcgtgcgggtggtatctct
cgccgtatcgaaggtgacgaccgtaccgagctgaaagaagcgctggcaagccttgagctg
ccggatggcatgggacttatcgttcgtaccgcaggcgtaggcaaatctgccgaggccttg
cagtgggacttaagcttccgcctgaagcactgggaagctatccagaaagcagctgaaagc
cgccctgctccattcctgatccaccaggaaagtaacgttatcgtgcgtgctttccgtgac
tatctgcgtcaggacattggcgaaattctgattgataacccgaaagtgcttgagctggct
cgccagcacatcgctgcactgggtcgtccggatttcaccagcaaaatcaaactgtacacc
ggtgaaatcccgctgttcagccattatcagattgaatcccagatcgagtccgccttccag
cgtgaagtgcgcctgccatccggtggttctatcgttatcgataccactgaagcgctgacc
gcaatcgacatcaactccgcacgtgcaacgcgcggtggcgatatcgaagaaacggccttc
aacaccaaccttgaagcagccgatgaaatcgcccgccagttgcgcctgcgcgacctgggt
ggcctgattgttatcgacttcatcgacatgacccctgtacgccaccagcgcgcggttgaa
aaccgtctgcgtgaagcggtacgtcaggaccgtgcgcgtatccagattagccatatctct
cgttttggcctgctggagatgtcacgtcagcgtctgagcccatcactgggtgagtccagc
catcacgtctgcccacgctgttctggtacaggtaccgttcgtgacaacgaatcactgtcc
ctgtcgattctgcgcctgattgaagaagaagcgctgaaagagaacaccaaagaagtccac
gccattgttccggtgccgattgcctcttacctgctgaacgaaaaacgtgccgcagtcagt
gcaattgaggcgcgtcagggcggcgtacgctgcatcatcgtgccaaacgaccagatgcag
accccgcactaccacgtgctgcgcgtccgcaaaggcgaagaaacctcgaccctgagctac
ctgctgcctaagctgcatgaagaagagatggccctgccatctgatgaagagcctgccgag
cgtaaactgcctgagcagcctgcattagcgaccttcatcatgccggaagcaccaccggaa
gccgcactggaaaaaccagctgcgaaacctgcggttcagaaacctgcacctgaagcggcg
aaagcacagcctgctcagccaggtcttctgggtcgtttcttcggcgcactgaaaaagatg
ttcgcaggcgaagaagcacagccagaacagccgcaggaagcaccgaaagaagcgaagcca
gagcgtcagcaggatcgtcgtaagcgtcagaacaaccgtcgcgatcgcaatgaccgtaac
gatcgtagcgatcgtaacgagcgccgtgataaccgttccgacaacaacgaaggtcgtgag
caacgcgaagacaaccgccgcaaccgtcgtgagaaacaacagcaaaacgttgaagatcgc
gaaattcgccagcaggcgggcgatgagtctgagaagagcaaacaacgcgacgagcaacag
cctcgccgtgagcgtaatcgtcgccgtaacgacgacaagcgccaggctcagcaggaagtt
aaaaacctgaaccgcgaagcccctgttgaacagcaggagaccgagcaggaagaacgtact
caggttatgccgcgccgtaaacagcgtcagctggctcagaaagttcgtttcgcgtcagag
caaacggaagagaccgcaattgtcgcgactgaaaccgttgctgaaatcgcgccgaacacc
caactggctaaagtagacctgccagccgtggtcgacaacagcgcagagcaggatgaaaac
agtgaaggccgtgataacgcagggatgccacgtcgctcccgtcgttctccgcgtcacctg
cgcgtaagcggccagcgtcgtcgtcgttaccgtgatgaacgttacccaggccagtcgcca
atgccgttagccgtagcctgtgcttccccggaaatggcctctggtaaagtctggatccgc
tatccggttgcacgtccagagcaactggttgaagaagcggttgtggctgaagagatcgtt
gctccagttgaagccgtaaaggaagtggtaacagaagccgcgaccattgttgagcctcag
gctgttgagagtgctcctcatgccgttgccgtggaaacaacccatccagaagtgattgct
gcgccagttgctgacgctgtacacatcatcgcggaagaagacactgtggttgctgagcag
gtagcagaagaagttgaacctgccgcaccggttgaagagatcgttgaagcggtcgctgaa
gacgtggtgaccgaagcccccgttgccgtagaggttaacgctgaaccggcacctgttgtt
gccgaagccatcgcgccagaagtgaagcctgaaccggttgtcgaagcggctgcccgtgct
cacgttgccactgcgccaatgacgcgtgcgccagcgccagagtacgtgccagaagcacct
cgccagagcgactgggttcgtccgaactttaacttcgacggcaaaggctctgccggtggt
cacagtgcaacgcaccaggcgactgcaccggctacccgcccacagtctgtcgagtaa
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