Exiguobacterium sp. AT1b: EAT1b_1773
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Entry
EAT1b_1773 CDS
T00897
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
eat
Exiguobacterium sp. AT1b
Pathway
eat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAT1b_1773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eat03019
]
EAT1b_1773
03009 Ribosome biogenesis [BR:
eat03009
]
EAT1b_1773
Messenger RNA biogenesis [BR:
eat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EAT1b_1773
Ribosome biogenesis [BR:
eat03009
]
Prokaryotic type
rRNA helicases
EAT1b_1773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Helicase_RecD
AAA_30
SWI2_SNF2
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACQ70699
UniProt:
C4L036
LinkDB
All DBs
Position
complement(1738982..1740427)
Genome browser
AA seq
481 aa
AA seq
DB search
MNKQQFTDYRLSDEITRALGIMKYESPTEVQQQVIPRALEREDLVVKAQTGSGKTAAFGI
PVIELIDWAENKPQVLVLTPTRELAVQVREDMTNIGRFKRIKATAVYGKEPFSKQREELK
QKTHIVVGTPGRVMDHIERETLSLDRIEYLIIDEADEMLNRGFLADVEKILQQLPKDRVT
MVFSATFPQDIERLCQKHMNAPARVAIESTGMTASTIEHRLLPVHRNEKLAVLQDITVVE
NPDSCMIFCRTKENVDTVYAELDKAGYSAERLHGGLEQEDRFAVMNGFKMGNFRYLVATD
VAARGIDVDNVELVINYDVPVEKESYVHRTGRTGRAGKQGTAITLMTRQEERLIGAIESY
VQFEIPMIDAPTEAEVAANQDAFEQKLSGRRVVRNNKTARINQDIMKLHFSGGKKKKLRA
VDFVGTIAKIPGVSADDIGIITINDQMTYVDILNGKGSIVLQAMETTPVKGKKLKVSKAR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacagcaatttactgattatcgcctgagcgacgagatcacgcgcgcgttgggc
attatgaaatacgaatcaccgactgaagtacaacagcaggtcatcccgcgtgcgctcgag
cgcgaagacttagtcgtcaaagcacagacgggaagcggaaagacagctgctttcgggatt
ccggtcatcgagctcatcgactgggccgaaaataaaccccaagtgctcgtcttgacgccg
acacgcgaactcgccgttcaagtacgggaagacatgacgaacatcggacgttttaaacga
atcaaagcgactgccgtctacgggaaagaaccgttttcgaaacaacgtgaagagttgaaa
caaaagacacatatcgtcgtcggtacgccaggtcgcgtcatggaccatatcgagcgtgag
accctttcactcgaccgcatcgaatacttgattatcgatgaggcggacgagatgctcaac
cgcggcttcctcgctgacgtcgagaagattcttcaacagttgccgaaagaccgcgtcaca
atggtcttctcagcgacattcccacaagatatcgaacgtctctgccagaagcatatgaat
gctccggcacgtgtcgcgatcgaatcgaccggcatgaccgcttcgacaatcgagcaccgt
ctcctcccggttcaccggaacgagaaactggctgtgcttcaagacatcacggtcgtcgag
aacccggacagctgtatgattttctgtcggacgaaagagaacgtcgatacggtgtacgcc
gagctcgacaaagccggttactcggctgaacgccttcacggcggactcgagcaagaggac
cgtttcgccgtcatgaacggattcaagatgggtaacttccgctacctcgtggcgacagac
gtcgcagcacgtggaatcgatgtcgataacgtcgagctcgttatcaactatgatgttcct
gtcgaaaaggaaagttacgtgcaccggacaggtcgtaccggacgtgccggcaaacaagga
acagcgatcacgctcatgacccgtcaggaagaacgtctcatcggagcgatcgaatcatac
gttcaatttgagattccgatgatcgatgcaccgacagaagcggaagttgcggctaaccaa
gatgcctttgagcagaagttgagcggacgacgcgtcgttcgaaacaacaagacagctcgt
attaaccaggacatcatgaagcttcacttcagtggcgggaagaagaaaaaacttcgcgcc
gtcgacttcgtcggaacaatcgccaaaatccctggtgtatccgctgacgacatcggaatc
atcacaatcaatgatcagatgacgtacgtcgatattctgaacggaaaaggttcgatcgtc
cttcaagcgatggagacgacgccggtcaaagggaagaaactcaaagtaagcaaagcgcgt
aaataa
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