Erwinia amylovora ATCC 49946: EAM_3082
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Entry
EAM_3082 CDS
T01199
Symbol
dacB
Name
(GenBank) penicillin-binding protein 4
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
eay
Erwinia amylovora ATCC 49946
Pathway
eay00550
Peptidoglycan biosynthesis
eay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EAM_3082 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eay01002
]
EAM_3082 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eay01011
]
EAM_3082 (dacB)
Enzymes [BR:
eay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EAM_3082 (dacB)
Peptidases and inhibitors [BR:
eay01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
EAM_3082 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
eay01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EAM_3082 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CBJ47756
LinkDB
All DBs
Position
3376916..3378349
Genome browser
AA seq
477 aa
AA seq
DB search
MRFSRIVTGITCAFMLQVQAAPVEEYSEYLPDGANLALMVQKIGAATPSIDYHSQQMALP
ASTMKVITALAALLQLGPDYRFHTQLESKGSLSGNTLHGDLVARFGGDPTLTRQDLRNMV
YALKKQGVQHVEGNLVIDTSVFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS
ASVPGDKAFIRVASYYPVNMFSEVRTLAKGSPDAQYCELDVVPGELNRFTLTGCLSQRAE
PLPLAFAIQDGASYAGALLKAELQNAGIDYSGHLVRQTLLTQPATVLAETRSAPLHDLLK
IMLKKSDNMIADTVFRTIGRERFGVPGTWRAGSDAVRQILRQKANIDLGNSIQVDGSGLS
RHDLITPATMMQVLQYIAQNDSQLDYISMLPLAGHDGTLLYRGGLHEAGVDGKVSAKTGS
LQGVYNLAGFMTTASGQRVAFVQFLSGYAVPPQDQRQRRVPLVRFESRLYKDVYRNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttcacgaattgttaccggcattacctgcgcatttatgctgcaagtgcaggct
gcgcccgtcgaagagtacagcgaatatttacccgacggcgcaaatctggcgctgatggta
cagaaaattggtgcggcaacgccatcgattgactatcacagccagcagatggcgctgccg
gcaagcaccatgaaggttattaccgccctggctgccctgttgcaactcggtccggattat
cgtttccatacccagctggaaagcaaaggcagcctgagtggtaatacgctgcacggcgac
ctggtggctcgctttggcggtgacccgactttaacgcgccaggatctgcgcaatatggtc
tacgccctgaaaaaacagggcgtgcagcatgttgaaggtaatctggtgattgatacttcg
gtcttcgccagccacgacaaagcccctggctggccgtggaacgacatgacccagtgcttc
agcgcaccgccggctgccgccattgtcgaccgtaattgcttctcggtatcgttatacagc
gcgtcggttccgggcgataaagcctttatccgcgtggcgtcttactatccggtaaacatg
ttcagtgaagtgcgcacgctggctaaaggctcgcccgatgctcagtactgcgagctggac
gtggtgcccggtgagttgaaccgtttcacgctgacaggctgcctgtcacagcgtgccgaa
ccgctgccgctggcctttgccattcaggatggtgccagctatgcaggcgcgctgctgaaa
gccgagctacaaaatgccggaattgattacagcggccatctggtccgccagacgctgctg
acccagccggccacggtactggctgaaacccggtcggctccactgcatgacctgttgaag
atcatgttaaagaagtccgataatatgatcgccgataccgtattccgcaccataggccgc
gagcgttttggcgtgccgggtacctggcgagcgggttcagatgccgtgcgtcagatcctt
cgtcagaaagcaaatatcgacctgggtaacagtattcaggtggatggatcggggctgtca
cgccacgatttaatcaccccggcaaccatgatgcaggtgctacagtacattgcgcaaaat
gacagccagctggactacatttcaatgctgccgctggccggtcatgatggcacgttactc
tatcgtggcggcctgcatgaggcgggcgttgacggcaaggtttcagccaaaaccggttct
ctgcagggagtctataatctggcaggcttcatgaccaccgccagtgggcaacgcgttgct
ttcgtacagttcctttcaggctatgccgttccgccgcaggaccagcgtcagcgccgtgtc
cccctggtgcgcttcgaaagtcgcctgtataaggacgtttaccggaataactaa
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