Erwinia amylovora ATCC 49946: EAM_3292
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Entry
EAM_3292 CDS
T01199
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eay03021
]
EAM_3292 (rpoH)
Transcription machinery [BR:
eay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EAM_3292 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
KORA
GerE
HTH_3
UCR_14kD
2Fe-2S_thioredx
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
CBJ47966
LinkDB
All DBs
Position
complement(3587727..3588581)
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AA seq
284 aa
AA seq
DB search
MTKEMQTLAIAPLGNLDSYIRAANAWPMLTAEEEKALAERLHYQGDLEAAKTLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDPTPDDEGEGRSMAPMLYLQDKSSDFANGIEEDNWEDHAADKLSDAMQGLDERSQHII
RARWLDDDNKTTLQELADQYGVSAERVRQLEKNAMKKLRVAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctattgctcctttaggcaacctggattcttacatc
cgggcggctaatgcctggcctatgctgacggcagaagaggaaaaagcgttggctgaacgg
ctgcattaccagggcgatctggaagcagctaaaacgctgatcctgtctcacctgcgcttt
gttgttcatgttgctcgtaactattccggttacggactgccgcaagcagacctgattcag
gaaggcaacattggcctgatgaaagccgtgcgccgttttaacccggaagtgggtgtgcgc
ctggtttcctttgccgtgcactggattaaagccgaaattcacgagtacgtgctgcgtaac
tggcgcatcgtgaaagtcgcaaccaccaaagcacagcgcaagctgttctttaatctgcgt
aaagccaagcagcgtttaggctggtttaaccaggatgaggtggaaatggtggcgcgcgag
ctgggcgtcagcagtaaagacgtgcgtgaaatggaatcacgcatggccgcccaggacatg
acctttgaccccacgcctgatgacgagggcgaaggccgttcaatggccccgatgctctat
ttacaggataagtcctctgactttgctaacggcattgaggaagataactgggaagatcac
gctgccgataagcttagcgatgcgatgcaggggctggacgaacgcagccagcatattatc
cgcgcccgctggctggacgatgacaacaaaaccacgctgcaggagctggccgaccagtac
ggtgtttccgctgaacgcgtacgtcagctggaaaagaacgcgatgaaaaaactgcgcgtg
gccatagaagcctga
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