Erwinia billingiae: EbC_36260
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Entry
EbC_36260 CDS
T01270
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ebi
Erwinia billingiae
Pathway
ebi03410
Base excision repair
ebi03430
Mismatch repair
ebi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EbC_36260 (recJ)
03430 Mismatch repair
EbC_36260 (recJ)
03440 Homologous recombination
EbC_36260 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebi03400
]
EbC_36260 (recJ)
DNA repair and recombination proteins [BR:
ebi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EbC_36260 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EbC_36260 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EbC_36260 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
DUF4180
Motif
Other DBs
NCBI-ProteinID:
CAX61157
UniProt:
D8MWF0
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All DBs
Position
complement(4042832..4044550)
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AA seq
572 aa
AA seq
DB search
MTSPTELRRRQAVEGAELPDELHPLLRRLYLHRGVLQAAELERGAKNLHPFHSLSGIERA
AEILQKALADNLCIMIVGDFDADGATSTALTVLALRSMGGRNIKYLVPNRFDDGYGLSPE
VVEQAAARGAQLIVTVDNGISSHAGVDLAHEKGISVVITDHHLPGETLPAAEAIVNPNLE
DCAFPSRSLAGVGVAFYLMLALRARLRDSGVEVLPNLAELLDLVALGTVADVVPLDANNR
ILVWQGLSRIRAGKCRAGIKALLEIANRDPRQLAASDLGFALGPRLNAAGRLDDMSVGVA
LLLSEDIAQARMLASELDALNQTRKEIEQGMQTEALALCDALESKDEALPLGIAMYHPEW
HQGVVGILASRLKERFHRPVIAFAPSGDGTLKGSGRSIAGLHMRDALERLDTLHPGLIIK
FGGHAMAAGLSLEEANFDRFRQHFGDLVGEWLDAEALQGVVWSDGELMAQELTLTTAELL
REAGPWGQAFPEPQFDGKFKLIQQRLVGERHLKVMIEPLGGGPLLDGIAFNIDTTQWPDP
SVRQVELAYKLDINEFRGNRSVQLIIDHLWPL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
ttgactagcccaaccgaactccgccgccgccaggcggtggaaggagccgagctccctgac
gaactccatcctctgcttcgccgtctgtatctgcaccggggtgttctgcaagcggctgaa
ctggagcgcggggcaaaaaatctgcacccgttccattccctgtccggcattgagcgcgct
gctgaaatcctgcaaaaagccctcgccgataacctgtgcataatgattgtcggagatttt
gatgccgatggcgccaccagcaccgcgttgacggtgctggcgctgcgcagcatgggcggc
cgcaacatcaaatacctggtgcctaaccgttttgacgatggttacggcctgagtccggaa
gtggttgagcaagcggcagcgcggggcgcgcagttaatcgtcaccgtggataacggcatc
tcttcccatgctggcgtggatctggcgcatgagaaggggatttcggtggtgatcaccgat
caccacctgcctggcgaaacgctgccggcggcggaagcgatcgttaacccgaatctggaa
gactgcgcgtttccgtcccgctcgctggcgggcgttggcgtggccttttacctgatgctg
gcgttgcgtgcgcgtctgcgcgacagcggcgttgaagtgctgccgaacctggccgagctg
ctggatttggtcgcgctgggcacggttgccgacgtggtgccgctggatgccaacaaccgc
attctggtctggcagggcttaagccgtatccgcgccggaaaatgccgtgccggcattaag
gcgctgctggagattgctaaccgcgatccccgccagctcgccgccagtgatttaggtttt
gcgctggggccacggctgaatgcggcgggcaggctggacgatatgtcggtcggcgtggcg
ctgctgctgagtgaagacattgcgcaagcgcggatgctggccagcgagctggatgcgtta
aaccagacgcgcaaagagattgagcagggaatgcagaccgaagcgctggccctgtgcgat
gcgctggaaagcaaagacgaagcgctgccactgggcatcgccatgtatcacccggaatgg
catcagggcgtggtcggcattctggcctcgcggctgaaagagcgtttccaccgtccggtg
attgcctttgctccttccggcgacggcacgctaaaaggttccggtcgttccatcgccggg
ctgcatatgcgcgatgcgcttgagcggctggatacgctgcaccccggattgatcatcaag
tttggtggccatgcaatggcggccggactgtcgctggaagaggcgaattttgatcggttc
cgtcagcactttggcgatctggtgggtgaatggctggatgcggaagcgctgcagggcgtg
gtctggtccgatggtgaactgatggcgcaggagctgacgcttaccaccgcagaactgctg
cgtgaagcgggtccgtggggacaggcgttcccggaaccgcagttcgacggtaaatttaag
ctgatccagcagcgtctggttggcgagcgtcaccttaaggtgatgatcgaaccgctgggc
ggcggcccgttgctggatggtatcgcctttaatatcgacaccacccagtggccggacccg
agcgtcaggcaggttgagctggcttacaaactggacatcaacgagtttcgcggcaaccgc
agcgtgcagctgatcatcgatcatctctggccgctgtaa
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integrated database retrieval system
