KEGG   Escherichia coli BL21(DE3): ECD_01913Help
Entry
ECD_01913         CDS       T00931                                 

Gene name
dacD
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6b
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
ebl  Escherichia coli BL21(DE3)
Pathway
ebl00550  Peptidoglycan biosynthesis
ebl01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ebl00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    ECD_01913 (dacD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases [BR:ebl01002]
    ECD_01913 (dacD)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ebl01011]
    ECD_01913 (dacD)
Enzymes [BR:ebl01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     ECD_01913 (dacD)
Peptidases [BR:ebl01002]
 Serine Peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   ECD_01913 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:ebl01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   ECD_01913 (dacD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID: ACT43764
UniProt: A0A140NAZ3
LinkDB All DBs
Structure
PDB: 

Position
complement(1977625..1978791)
Genome map
AA seq 388 aa AA seqDB search
MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN
PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD
LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS
AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG
FNLIASAVDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIW
YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLNGKELTAPISAHQRVGEIELYDRDKQV
AHWPLVTLESVGEGSMFSRLSDYFHHKA
NT seq 1167 nt NT seq  +upstreamnt  +downstreamnt
ttgaaacgccgtcttattattgctgcttctttgttcgtttttaatttatcgtctggtttt
gcggcggaaaacattcctttttcacctcagcctccagagattcatgccgggtcctgggta
ttgatggattacaccaccggtcagattctcaccgcgggtaatgagcatcaacagcgcaat
cccgccagcctgacaaagctgatgacgggctatgtcgtggatcgcgctatcgatagtcat
cgcattacgccagacgatattgtcaccgtggggcgtgatgcgtgggcgaaagataatccg
gtgtttgtcggttcttcactgatgtttttgaaagagggcgatcgcgtatcggtacgtgat
ttaagccgaggtttaattgtggattccggaaatgacgcgtgtgttgctctggctgactat
attgccggtgggcaacggcagtttgttgaaatgatgaacaactatgccgagaagctgcat
ctcaaggatacgcattttgaaacagtgcatggtctggatgcacctggccagcatagctcg
gcttatgatttagccgtgctttctcgcgctatcatccacggcgagcccgagttttatcat
atgtacagtgagaaaagcctcacctggaacggtatcacccagcaaaaccgtaacgggtta
ttgtgggataagaccatgaatgttgacggcctgaaaacgggccatacttctggtgccggg
tttaatcttattgcttcggctgtagacgggcagcgtcgcctcattgcagtggtaatgggt
gctgacagcgcaaaaggtcgtgaggaagaggcaaaaaaattactgcgttgggggcaacaa
aactttactacggtgcaaattttgcaccgtaggaaaaaggtcggtacggaacgcatctgg
tatggtgataaagaaaatatcgccctgggaacggaacaagagttctggatggtgctaccg
aaagccgaaattccacatatcaaagccaaatatacccttaatggtaaagagctcaccgcg
ccaattagcgcccatcagcgggtaggggaaattgaactttacgaccgtgataaacaggtg
gcgcactggccgctggttaccctggaatctgtcggggaaggcagcatgttttctcgcctg
agtgattatttccaccataaggcctga

DBGET integrated database retrieval system