Escherichia coli B REL606: ECB_02429
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Entry
ECB_02429 CDS
T00944
Symbol
hcaR
Name
(GenBank) DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism
KO
K05817
LysR family transcriptional regulator, hca operon transcriptional activator
Organism
ebr
Escherichia coli B REL606
Brite
KEGG Orthology (KO) [BR:
ebr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ebr03000
]
ECB_02429 (hcaR)
Transcription factors [BR:
ebr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ECB_02429 (hcaR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACT40083
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Position
complement(2588705..2589595)
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AA seq
296 aa
AA seq
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MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA
GECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL
IELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEI
TAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTL
IPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggaactacggcatttacgctatttcgtcgcagtggcgcaggcactgaactttacccgt
gcggcggaaaaactgcatacctcacagccttcgttaagcagccagatccgcgatcttgaa
aactgtgtcggtgttccgttactggtgagggataagcgcaaagtcgcgttgacggcggcg
ggagaatgttttctccaggacgcgctggcaatcctcgaacaagcggaaaatgccaaatta
cgggcgcggaaaattgttcaggaagacagacaattaaccattggctttgtgccatcggcg
gaagtgaatttattgccaaaagtattaccgatgtttcgtctcagacagccagacaccttg
attgagctggtgagtttaatcaccacgcaacaggaggaaaaaattcgccgtggtgaactc
gacgtcggcttaatgcgccatcctgtttatagcccggagattgattatctggagcttttt
gacgaaccattagtggtggtgttaccggttgatcaccctttagcacatgaaaaagagatc
accgccgcgcaactggatggcgtgaatttcgtcagtaccgatccggcgtattccggttcg
cttgcgccgatcgttaaagcgtggtttgcgcaagaaaacagccagccaaatatcgtccag
gtggcaacgaatattctggtgaccatgaatctggtgggcatggggctgggcgtcactttg
atacccggttatatgaataattttaataccgggcaggttgtttttcgtcccattgccgga
aatgtgccttccattgctttactgatggcgtggaagaaaggggagatgaagccggcatta
cgcgatttcatcgccattgtgcaggaacgtttggcaagcgtaacggcataa
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