Shimwellia blattae: EBL_c06930
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Entry
EBL_c06930 CDS
T02111
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ebt
Shimwellia blattae
Pathway
ebt03410
Base excision repair
ebt03430
Mismatch repair
ebt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EBL_c06930
03430 Mismatch repair
EBL_c06930
03440 Homologous recombination
EBL_c06930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebt03400
]
EBL_c06930
DNA repair and recombination proteins [BR:
ebt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EBL_c06930
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EBL_c06930
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EBL_c06930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
DUF2065
Motif
Other DBs
NCBI-ProteinID:
AFJ45817
UniProt:
I2B5L3
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All DBs
Position
707748..709481
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AA seq
577 aa
AA seq
DB search
MEHKTQLRRRVASDTAALPDTLPPLLKRIYASRGVVSAADLERSVKGMLPWQQLNGIESA
VKLLHDALQHQHHIMIVGDFDADGATSTALSVLALRAMGGARISFLVPNRFEDGYGLSPE
VVDQAHARGAEIIMTVDNGISSHSGVARAHELGIPVLVTDHHLPGDLLPAAEAIINPNLA
DCTFPSKSLAGVGVAFYLMLALRTHLRDAGWFEQQGIAIPNLAELLDLVALGTVADVVPL
DMNNRILTWQGLSRIRAGKCRPGIRALLEIANRDAARLTATDLGFALGPRLNAAGRLDDM
SVGVSLLLSDNLAQARMLASELDALNQTRKEIEQGMQSEALALCDDLGHQAQTLPAGLAL
YHPQWHQGVVGILASRIKERFHRPVIAFAPAGDGLLKGSGRSVQGLHMRDALERLDTLHP
GMMQKFGGHAMAAGLTLEEAQFDAFSERFAALVNNWLDPAMLQGEIWSDGPLTAPEMTME
MAELLRDAGPWGQMFPEPVFDGKFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNIDPA
RWPDNSVREVELAYKLDVNEFRGNRSLQLIIDNIWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtggaacataaaacacaacttcgccgccgggtcgccagtgacacggcggccctgccggat
accctgccgccgcttcttaaacgtatctatgccagccgtggggtagtgagtgcggcggat
ctggagcgcagcgtaaaaggcatgctgccctggcagcagcttaacggtattgagagcgcc
gttaagctcctgcacgacgcgctgcaacaccagcaccatatcatgattgtcggcgatttc
gatgcggacggggcaaccagcaccgcgctgagcgtgctggcgctgcgcgccatgggcggt
gcccgcatcagcttcctggtgccgaaccgctttgaagatggctacggcctcagcccggag
gtggtcgatcaggcccacgcccggggtgcggaaatcatcatgaccgtggataacggcatc
tcatcccacagcggtgtggcccgggcccatgagctggggatcccggtgctggtgaccgat
caccacctgccgggggatctgctgcccgcggccgaagcaatcattaacccgaacctggca
gactgcacgtttccctccaagtctctggcgggggtgggggtggctttttacctgatgctg
gccctgcgcacccatctgcgcgacgcgggctggtttgaacagcagggaatcgccattccc
aacctggcggagctgctggatctggtggcgctgggcaccgtggccgatgtggtgccgctg
gatatgaacaaccgcattctcacctggcaggggctaagccgcatccgcgccgggaaatgc
cgcccgggcattcgcgcgctgctggagattgccaaccgcgatgcagcgcggctcacagcc
acagatctcgggttcgccctggggccacggctgaatgccgctggccggctggacgatatg
tccgtgggggtatccctgctgctgagcgataatctggcccaggcgcggatgctggccagc
gagctagacgccctgaaccagacccgtaaagagatagagcagggcatgcagagcgaagcc
ctggccctgtgtgatgatctggggcaccaggcgcagaccctgcccgccgggctggcactg
taccacccccagtggcaccagggggtggtggggatcctggcttcccgcatcaaagagcgt
ttccaccgcccggttatcgcctttgccccggcgggtgacggcctgctgaagggctccggc
cgttcggttcaggggctgcatatgcgcgacgcgctggagcgactggatacgctgcacccg
ggcatgatgcagaaattcggtggtcatgccatggctgccgggctgacccttgaagaggcg
cagtttgatgccttcagcgagcgttttgccgccctggtgaacaactggctggatccggct
atgctacagggagagatctggtcagatggcccgctcacggccccggagatgaccatggag
atggccgagctgctgcgcgatgcgggcccctgggggcagatgttcccggaaccggtattt
gacggtaagttccgcctgctgcaacagcgcatcgtgggggagcgccaccttaaggtgatg
gtcgagccggtcggtggcgggccgctactggacggtatcgcgtttaatatcgatcctgcc
cgctggccggataacagcgtgcgcgaggttgagctcgcttataagctggatgtaaacgag
tttcgcggcaaccggagtttgcaattgattatcgacaatatctggccattataa
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