Shimwellia blattae: EBL_c15500
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Entry
EBL_c15500 CDS
T02111
Symbol
sdiA
Name
(GenBank) DNA-binding transcriptional activator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
ebt
Shimwellia blattae
Pathway
ebt02020
Two-component system
ebt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EBL_c15500 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EBL_c15500 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ebt03000
]
EBL_c15500 (sdiA)
Transcription factors [BR:
ebt03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
EBL_c15500 (sdiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
HTH_20
Sigma70_r4
HTH_38
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFJ46647
UniProt:
I2B7Z3
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All DBs
Position
1615045..1615746
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AA seq
233 aa
AA seq
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MQDSDFFHWWRECSLAFQSVETAPELLLVQQKQSVLMGFEFCAFCLRHPIPFTRQNLLTL
ATNYPEQWMAGQHMEHIAACDVILKEQPGSRCFLSWHDAHVPRGAGDVHQGFTQGVVASN
RTVGYLSVADCKVRMMTMSEEELMLRMQHLCELSMAALQRIDTPMLEARAMRLSKREREI
LQWTAEGKTSSEIAMILSISENTVNFHQKNMQKRFNAPNKTQIACYAAATGLI
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatagcgattttttccactggtggcgggaatgctcactggcgtttcagtctgtt
gagacagcgccggagctgctgctggtgcagcaaaaacagtcggtactgatggggtttgaa
ttttgcgcgttttgcctgcgccaccccatcccgtttacccggcaaaaccttcttaccctg
gcgaccaattatccggaacaatggatggccgggcagcatatggaacatatcgccgcctgt
gatgtgatactcaaagaacagccgggaagccgctgctttttatcctggcatgatgcgcac
gtgccccggggggccggagacgttcaccaggggttcacccagggggtggtggcatctaac
cggacggttggctatttatcggtggctgactgcaaagtaagaatgatgaccatgtccgaa
gaagagctgatgctgcggatgcagcacctgtgtgagctgagtatggcggccctgcagcgc
attgataccccgatgcttgaggccagagccatgcggctcagtaagcgcgagcgcgagatc
ctgcagtggacggcagaagggaaaacctcatctgaaatcgcgatgattttatctatctca
gaaaatacggtgaattttcaccagaaaaatatgcaaaagcgctttaatgcgccgaataaa
acccagatagcctgctatgcggcagcaacgggattaatttaa
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