Shimwellia blattae: EBL_c38940
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Entry
EBL_c38940 CDS
T02111
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ebt
Shimwellia blattae
Pathway
ebt00540
Lipopolysaccharide biosynthesis
ebt01100
Metabolic pathways
ebt01250
Biosynthesis of nucleotide sugars
Module
ebt_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EBL_c38940 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ebt01005
]
EBL_c38940 (rfaD)
Enzymes [BR:
ebt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
EBL_c38940 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ebt01005
]
Core region
EBL_c38940 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
AFJ48922
UniProt:
I2BEG8
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All DBs
Position
4032266..4033198
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDIGYRDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLVQI
MSGEEFGDIEAVFHEGACSSTTEWDGKYVMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTADFIESREYEQPLNVYGYSKFLFDEYVRQILPEATSQITGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGENPKLFEGSDSFRRDFVYVGDVANMNLWFWQNGVSGIYNCGTGRA
ESFQAVADATLAWHKKGQVEYIPFPDKLKGRYQAFTQADLTQLRAAGYDKPFKTVAEGVT
EYMDWLNRKA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgtcaccggcggtgctggttttatcggcagtaatattgtcaaagcactgaat
gatatcggttatcgcgacatcctggttgtcgataatctgaaagacggcaccaaattcgtc
aacctggttgatctgaacattgccgactatatggacaaagaagatttcctggtccagatc
atgtccggcgaagagttcggcgatattgaggcggtattccacgaaggcgcctgctcttcc
accaccgagtgggatggcaagtacgtgatggataacaactatcagtactctaaagagctg
ctgcactactgcctggagcgggaaattccgttcctgtatgcctcttcggcagcaacctac
ggcggccgtaccgcagatttcattgaatcccgcgaatacgagcagccgctcaacgtatac
ggctactccaaattcctgttcgacgagtatgtccgccagatcctgccggaagccacctcc
cagatcaccggctttcgctacttcaacgtgtatggcccccgtgaaggccacaaaggcagc
atggcaagcgtggctttccacctcaatacccagctgaataacggcgagaacccgaaactg
tttgaaggcagtgacagcttccgccgcgattttgtttatgtgggcgatgtggcgaacatg
aacctgtggttctggcagaacggggtttccgggatctataactgcggcaccggccgggca
gaatccttccaggccgtggccgatgcgaccctcgcatggcacaaaaaaggccaggtcgaa
tacattccgttcccggataagctcaaaggccgctatcaggcatttacccaggcagattta
acccagctgcgcgctgccggttacgataagccgtttaaaaccgttgccgaaggggtaacg
gaatacatggactggctgaaccgcaaggcgtaa
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