KEGG   Empedobacter brevis: F0358_15040
Entry
F0358_15040       CDS       T06196                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ebv  Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:ebv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ebv03400]
    F0358_15040
Enzymes [BR:ebv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F0358_15040
    5.6.2.6  RNA 3'-5' helicase
     F0358_15040
DNA repair and recombination proteins [BR:ebv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    F0358_15040
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QES94438
LinkDB
Position
complement(3145343..3147754)
AA seq 803 aa
MQAKDREAFGFQKEAWQRFADGYSGMVVAPTGFGKTYSLFLAVVIDFFNHPENYGNGLKL
LWITPLRSLAKDLARAMQEAIDEIGLDWVVEVRNGDTDVQQKTRQTKIMPDVLLVTPESL
HLLLAQKNNQRFFKHLKCIAVDEWHELLSTKRGVMVELALAVLKFQQSNVRIWGITATIG
NLDQALDVLIPNAKKRTKVVAKEQKKIEILSVYPAEVEILPWAGHLGGKLVKEVVSIILK
SKSALIFTNTRSQSEMWYQLLLDAYPDFAGQIALHHSSIDANLRQWVEENLSSGLLKAVV
STSSLDLGVDFKPVDTVIQIGSSKGVARFMQRAGRSGHSPFETSKIYFVPTHSLELIEAS
ALKEAVKNKVIENREPFILAYDVLVQFLVTLALGGGFYPKDIYPIIKNTYAFSEMTEDEW
KWCIYFITKGGKIGKNYEEFHKVLKQEDGKLLVEKRKVGMLHRMNIGAIVSDSMLRVKFL
SGGYIGMIEEYFITKLRKGDKFVLAGRVLEFAMLKDMTVFVKLSSGKAITPSWLGGRLPL
SSNLSYFLRKKLAESLSPNAREKELRFLHPLLVNQNENSHIPKEDEFLVERIKTREGHHL
FFYPFEGRLVHEVMAALLSYRISKLYPISFSMAMNDYGFELFSDQEIQLTDAELHKILSK
ENLMQDVTSSINATEMARRKFRDIAVISGMVVQTMPGRQMNNKSLQASSGIIFSVLEEYD
PQNLLLRQAYTEVFNQQLEEQRLTAAFDRIHQSKIIYIYSDQFTPLSFPIKVDSLRHSLS
SEDLSARIRKMQEANLKIKAKRK
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgcaagccaaagatagggaagcttttggttttcaaaaggaagcttggcaacgctttgcg
gatggctattctgggatggttgttgctcctacaggctttgggaaaacctattctcttttt
ttagcggttgttattgatttttttaatcatcccgaaaattacggaaacggattgaaactc
ctttggataactccacttcgttcgttagcgaaagatttggcgagagctatgcaagaagct
attgacgaaattgggctcgattgggtggtggaagtacgaaatggtgacaccgatgtacaa
cagaagacccggcaaaccaagataatgccagatgtacttcttgtaactccagaaagtcta
catttattattggcacaaaaaaataaccaaagattcttcaagcatcttaaatgtattgct
gttgatgaatggcacgaattgttgagtaccaaacgtggcgtgatggtagaattggcttta
gctgttctgaaatttcagcaatctaacgtcagaatttggggaattacggcaacgattggc
aatttggatcaagccttggacgttttgattccaaatgctaaaaagagaaccaaagttgtc
gccaaagaacaaaagaaaattgaaattctttccgtttatcctgctgaagtcgaaatttta
ccatgggcaggacatttgggcggaaaattggtaaaggaagttgtttctattattttaaaa
agtaaatcggctcttattttcactaatacgcgaagccagagcgaaatgtggtatcaactt
ttattggatgcttatcctgattttgctggacaaattgcgttgcatcacagttccattgat
gcaaatttgcggcaatgggtggaagaaaatttgagttccgggttgttaaaagcggtagtt
tccacttcttcattggatttgggtgtcgattttaaacctgtggatacagtgattcaaatt
gggtccagtaaaggcgttgcacgatttatgcaaagagccggacgaagcgggcattcgcca
tttgaaacatcaaaaatctactttgtccccactcattctttagaactgattgaagcttca
gcattaaaagaagccgttaagaataaagttatcgaaaacagagaacccttcattttggcg
tacgatgttttggttcaatttctcgttactttggctttggggggcggtttttatccgaaa
gatatttatcccattatcaaaaatacctatgctttttctgaaatgacggaagatgaatgg
aaatggtgtatttattttattacaaaaggtggaaagataggaaaaaattacgaagaattt
cacaaagtgttgaagcaggaagatggtaaacttctcgtcgagaaacgtaaagttggtatg
ttacatcgcatgaatattggagcgattgtaagcgattcgatgttacgagttaagtttttg
tcggggggttatattgggatgattgaggaatattttattactaaactaaggaaaggggat
aaatttgttttggcaggacgcgttttagaatttgccatgttgaaagatatgacggttttt
gtaaaattgtcgagtggcaaagccattacacctagttggctgggtggaagattgccttta
tcttcaaatttgagttattttttgcgcaaaaaattagccgaatctctctcaccaaatgct
cgagaaaaagaacttcgttttttgcatcctttgttggtaaatcaaaatgaaaattcgcac
attccgaaagaagatgaatttctggtagaacgtatcaaaacgagagaaggtcatcatttg
tttttttacccatttgaaggaaggttggtgcatgaagtgatggctgctttattatcctat
cgcatttccaaattgtatcctatcagtttttcgatggcgatgaatgattatggttttgaa
cttttttcggatcaggaaattcaactaacggatgcggaattgcataagattctttccaaa
gaaaacctgatgcaagatgtgactagcagtataaatgcgactgaaatggcacgtagaaaa
tttagagatattgctgtgatttctggaatggtggtgcaaacgatgcccggaagacaaatg
aataataaatctttgcaggcttcttcgggaattatattttcggttttggaagagtatgat
ccgcaaaatttattgttgagacaggcttatacagaagtttttaaccagcaactggaagaa
caacgattaacagcagcttttgatcggattcatcaaagtaagattatatatatatattct
gatcagtttacaccgttaagctttccaatcaaagtggatagtttaagacattctctttcc
agtgaagatttgagtgcgcgaattagaaaaatgcaagaagctaatttgaagataaaagca
aaacgaaaatga

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