Entry |
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Name |
alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase;
phnJ (gene name)
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Class |
Lyases;
carbon-phosphorus lyases;
carbon-phosphorus lyases (only sub-subclass identified to date)
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Sysname |
alpha-D-ribose-1-methylphosphonate-5-phosphate C-P-lyase (methane forming)
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Reaction(IUBMB) |
alpha-D-ribose 1-methylphosphonate 5-phosphate + S-adenosyl-L-methionine + reduced electron acceptor = alpha-D-ribose 1,2-cyclic phosphate 5-phosphate + methane + L-methionine + 5'-deoxyadenosine + oxidized electron acceptor [RN: R10204]
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Reaction(KEGG) |
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Substrate |
alpha-D-ribose 1-methylphosphonate 5-phosphate [CPD: C20423];
S-adenosyl-L-methionine [CPD: C00019];
reduced electron acceptor
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Product |
alpha-D-ribose 1,2-cyclic phosphate 5-phosphate [CPD: C20440];
methane [CPD: C01438];
L-methionine [CPD: C00073];
5'-deoxyadenosine [CPD: C05198];
oxidized electron acceptor
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Comment |
This radical SAM (AdoMet) enzyme is part of the C-P lyase complex, which is responsible for processing phophonates into usable phosphate. Contains an [4Fe-4S] cluster. The enzyme from the bacterium Escherichia coli can act on additional alpha-D-ribose phosphonate substrates with different substituents attached to the phosphonate phosphorus (e.g. alpha-D-ribose-1-[N-(phosphonomethyl)glycine]-5-phosphate and alpha-D-ribose-1-(2-N-acetamidomethylphosphonate)-5-phosphate).
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History |
EC 4.7.1.1 created 2013, modified 2016
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Pathway |
ec00440 | Phosphonate and phosphinate metabolism |
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Orthology |
K06163 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase |
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Genes |
» show all
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Reference |
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Authors |
Kamat SS, Williams HJ, Raushel FM |
Title |
Intermediates in the transformation of phosphonates to phosphate by bacteria. |
Journal |
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Sequence |
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Reference |
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Authors |
Jochimsen B, Lolle S, McSorley FR, Nabi M, Stougaard J, Zechel DL, Hove-Jensen B |
Title |
Five phosphonate operon gene products as components of a multi-subunit complex of the carbon-phosphorus lyase pathway. |
Journal |
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Reference |
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Authors |
Zhang Q, van der Donk WA |
Title |
Answers to the carbon-phosphorus lyase conundrum. |
Journal |
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Other DBs |
ExplorEnz - The Enzyme Database: | 4.7.1.1 |
ExPASy - ENZYME nomenclature database: | 4.7.1.1 |
BRENDA, the Enzyme Database: | 4.7.1.1 |
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LinkDB |
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