Equus caballus (horse): 100033936 Help Entry 100033936         CDS       T01058                                  Symbol PTCH1 Name (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism ecb  Equus caballus (horse) Pathway ecb04024   cAMP signaling pathway ecb04340   Hedgehog signaling pathway ecb04360   Axon guidance ecb05200   Pathways in cancer ecb05205   Proteoglycans in cancer ecb05217   Basal cell carcinoma Brite KEGG Orthology (KO) [BR:ecb00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     100033936 (PTCH1)    04024 cAMP signaling pathway     100033936 (PTCH1)  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     100033936 (PTCH1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100033936 (PTCH1)    05205 Proteoglycans in cancer     100033936 (PTCH1)   09162 Cancer: specific types    05217 Basal cell carcinoma     100033936 (PTCH1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Patched Sterol-sensing Motif Other DBs NCBI-GeneID:  100033936 NCBI-ProteinID:  NP_001296399 Ensembl:  ENSECAG00000000141 VGNC:  21979 LinkDB All DBs Position 23:1688050..1757544 Genome browser AA seq 1301 aa AA seqDB search MFNPQLMIQTPKEEGANVLTAEALRQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT ETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLQWTNFDPLEFLEELKKI NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNATKPLDMALVLNGGCHGLS RKYMHWQEELIVGGTLKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDK AAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVG VDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR AFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYT ETQDNTRYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVT MTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKV VVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKAD YPNIQHLLYDLHKSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPN NYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKRRLVDADGIINPSAFYIYLTAWVSNDP VAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAI EKVRAICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSISVVLACTFLVCAVFLLNPW TAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDK NRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLL PVLLSFFGPYPEVSPANGLNRLPTPSPEPPPSVVRFAMPPTHTHNGSDSSDSEYSSQTTV SGISEELRHYEAQQATRGPAHQVIVEATENPVFARSTVVHPEARHHPPSNPQQQPHPDSG SLPPGRPGLQPRREPLREGLRPPPYRPRRDAFEISTEGHSGPGNRDRVGPRGARSHNPRH PAFTATGSSMPSYCQPITTVTASASVTVAVHAPPASGPGPSRNPRGGLYPGSEDYPETDH GLFEDPHVPFNVRCERRDSKVEVIELQDVECEERPRGRSSD NT seq 3906 nt NT seq  +upstreamnt  +downstreamnt atgtttaatcctcagctcatgatccagaccccgaaagaagaaggtgctaacgtcctgacg gcagaagcgctccgacagcacctggactcggcgctccaggccagccgtgtccacgtgtac atgtacaacaggcagtggaaattggaacatttgtgttataaatccggagaacttatcaca gaaacaggttacatggatcagataatagagtatctttacccttgtttaattattacacct ttggactgcttctgggaaggggcgaagctacaatctgggacagcatacctactaggtaag cctcctttacagtggacaaactttgaccctttggaattcctagaagagttaaagaaaata aactatcaggtggacagctgggaggaaatgctgaataaggctgaagttggtcacggttac atggaccggccctgcctcaatccagcggatccagactgccccgccacagcccccaacaaa aacgccaccaaacctcttgatatggcccttgttttgaatggtggatgtcatggcttatcc aggaagtatatgcactggcaggaagagctgattgtgggtggcactctcaagaacagcact gggaagctcgtcagcgcccacgccctgcagaccatgtttcagctaatgacccccaagcaa atgtatgaacacttcaaggggtacgagtatgtctcgcatatcaactggaatgaggacaag gctgcagctatcctggaggcgtggcagaggacctacgtggaggtggttcatcagagcgtc gctcagaactccactcagaaggtgctttcctttaccaccaccaccctggacgacatcctc aagtccttctctgatgtcagcgtcatccgggtggccagtggctacttactgatgcttgcc tatgcctgtttaaccatgctgcgctgggactgctccaagtcccagggtgccgtggggctg gctggcgtcctgttggttgcactgtcagtggctgcaggattgggcctgtgctcattgatc gggatttcctttaacgctgcaacaactcaggttttgccatttcttgctcttggtgttggt gtggatgatgttttccttctggcacatgcatttagtgaaacaggacagaataaaagaatc ccttttgaggacaggaccggggagtgcctcaagcgcacgggggccagcgtggccctcacc tccatcagcaatgtcacagctttctttatggccgccttgatcccgattcccgctctgcgg gcattctccctgcaggcggctgtagtagtggtgttcaattttgctatggttctgctcatt ttccctgcaattctcagcatggatttgtatcgacgtgaggacaggagattggatattttc tgctgttttacaagcccctgtgtcagcagagtgattcaggtggaacctcaggcctacacg gagacgcaggataacactcgctacagccccccgcccccctacagcagccacagctttgcc catgaaacacagatcaccatgcagtccaccgtgcagctgcgcaccgagtacgaccctcac acacacgtgtactacaccactgccgagcctcgctctgagatctctgtgcagcctgtcacc atgacccaggacaccctcagctgccagagccccgagagcaccagctccacgagggacctg ctctcccagttctctgactccagcctccactgcctcgagcctccctgcaccaagtggacg ctctcgtcattcgctgagaaacactatgctcctttcctcttgaaaccaaaagccaaggtc gtggtgatcttccttttcttgggcttactgggggtcagcctttatgggaccacccgagtg cgtgacggtctggaccttacagacattgtgcctcgggaaaccagagaatatgactttatt gctgcccagttcaaatacttctctttctacaacatgtatatagtcacccagaaagcagac tacccgaatatccagcacttactttacgaccttcacaagagtttcagtaacgtgaagtat gtcatgttggaagaaaataaacagcttcccaaaatgtggctgcactacttcagagactgg ctccaaggacttcaggatgcatttgacagtgactgggaaactgggaaaatcatgccaaac aattacaaaaatggatcagatgatggggtccttgcctacaaactcctggtgcaaactggc agccgcgataagcccatcgacatcagtcagttgactaaacggcgcctggtggatgcagac ggcatcattaatcccagcgctttctacatctacctgaccgcttgggtgagcaatgacccc gtggcttatgctgcctcccaggccaacatccggcctcaccgtcctgagtgggtccacgac aaagccgactacatgccagagaccaggctgagaatccctgcagcagagcccatcgaatac gctcagttccctttctacctcaatggcttgcgtgacacctcagacttcgtggaggcgatc gaaaaggtcagagccatctgcaacaactacacgagcctggggctctccagctaccccaac ggctaccccttcctcttctgggagcagtacatcggcctccgccactggctcctgctgtcc atcagcgtggtgctggcctgcacgttcctcgtgtgtgccgtcttcctcctgaacccctgg acggccgggatcattgtgacggtcctggccctgatgacggtcgagctcttcggcatgatg ggcctgattggaatcaagctcagtgctgtgcctgtggtcatcctgatcgcgtccgtcggc ataggagtggagttcaccgtccatgttgctctggcctttctgacagccatcggcgataag aaccgcagggctgtgcttgccctggagcacatgtttgcgcccgttctggacggtgctgtt tccactctgctgggagtgctaatgcttgcaggatccgagtttgatttcattgtcaggtat ttctttgctgtcctggccatcctgacagtcctgggtgttctcaatggactggttttgctt cccgtccttttgtccttctttgggccgtaccctgaggtgtctccagccaatgggctaaac cggctgcccaccccctcccctgagccgccccccagcgtggtccggtttgccatgcccccc actcacacacacaatgggtctgattcgtctgactccgagtacagctctcagacgacagtg tctggcatcagcgaggagctgcggcactacgaggcccagcaggccaccaggggccctgcc catcaagtgattgtggaagccacagaaaaccctgtcttcgcccgctccaccgtggtccat cctgaagcgagacaccacccaccctcaaaccctcaacagcagccccacccagactcaggg tccctgccacctggacggccaggcctgcagccccggagggagcccctcagagaaggcttg cggccacccccctacagaccgcgcagagacgctttcgaaatttctactgaagggcattct ggccctggcaatagggaccgtgtgggcccccggggagctcgttcccacaaccctcggcac ccagccttcactgccaccggcagctccatgcccagctactgtcagcccatcaccaccgtg acggcctctgcgtccgtgactgtcgctgtgcacgccccgcctgcctctgggcctgggccc agtcggaacccccgagggggcctctacccaggctctgaggactatcctgagactgaccac gggctctttgaggacccccatgtgcctttcaacgtccggtgcgagaggagggattccaag gtggaggtcatcgagctgcaggacgtggagtgtgaggagaggccccggggccgcagctcc gactga

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