Equus caballus (horse): 100034027
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Entry
100034027 CDS
T01058
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04838
voltage-gated sodium channel type V alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
100034027 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100034027 (SCN5A)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100034027 (SCN5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
100034027
NCBI-ProteinID:
NP_001157367
Ensembl:
ENSECAG00000000813
VGNC:
22740
LinkDB
All DBs
Position
16:48225733..48331206
Genome browser
AA seq
2019 aa
AA seq
DB search
MADFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGLAASQESREGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYILSPFHPI
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNDTNGSVEADGLV
WESLDLYLNDPENYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTTCERRSKRRK
RMSSGTEECGDDRFPKSDSEDGPRAMNRLSISHGLSRTSMKQRSSRGSIFTFRRRDLGSE
TDFADDENSTAGDSESHRTSLLVPWPLRRPSALGQPSPGTSAPSHALNGKRNSTVDCNGV
VSLLGAGDPEATSPGSRLLRPIMLERPPDTTTPSEEPGRPQMLSPQAPCADGFEEPGERQ
RALSAVSVLTSVLEELEESHRKCPPCWTRFAQRYLIWECCPLWMSIKQRVKFMVMDPFAD
LTITLCIVINTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSELRYRISDSGLLPRWHMMDFFHAFLIIFRILCGE
WIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDGEMNN
LQLALARIQRGLRFVKRTTWDFCCGLLQQRPQKPAALATRDQLPSCIATSGSPQPPETEK
APPARKETRFEEGNRPGQGTPGDPEPVCVPIAMAESDTDDQEEEEENSLGTEEESSKQES
HPVSGGQEALPEPRAWSQVSETTSSEAYEASAAPAERRQQRQAEPPAPGCSETQEDSYSE
GSTADMTNTADLMEQIPDLGEDVKDPEDCFTEGCVRRCPCCTVDTTQGPGKVWWQLRKTC
YRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKW
VAYGFKKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIV
NNKSDCESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGFEEQP
QWEYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKYQGFLFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVN
ILAKINLLFVAIFTGECIIKMTALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFS
PTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMAN
FAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPSCDPNLPNSNGS
RGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIW
EKFDPEATQFIEYSALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFT
KRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATIIQRAFRRHLLQ
RSMKHASFLFRQQAGSSGLSEEDAPEQEGLIAYMMNENFSRRHGPPSSSSISSTSFPPSY
DSVTRATSDNLQARVSDYSRSEDLADFPPSPDRDRESIV
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcctgttacctcggggcaccagcagcttccgaaggttcacccgggagtcc
ctggcagccatcgagaagcgcatggcagagaagcaagcccggggcttggccgcctcacag
gagagccgtgagggactgcccgaggaggaggctccccggccccagctggacctgcaggcc
tccaaaaagctgcccgatctctatggcaacccgccccgagaactcatcggggagcccctg
gaggacctggaccccttctatagcacccaaaagaccttcatcgtgctgaataaaggcaag
accatcttccggttcagtgccaccaatgccttgtatatcctcagtcccttccaccccatc
cggagagcggccgtgaagattctggtccattcgctcttcagcatgctcatcatgtgcacc
atcctgaccaactgcgtgttcatggcccagcacgaccctccaccctggaccaagtatgtc
gagtacaccttcactgccatttacacctttgagtctctggtcaagattctggctcgaggc
ttctgcctgcatgcattcacctttcttcgggacccgtggaactggctggacttcagcgtg
attgtcatggcatacaccactgaatttgtggacctgggcaatgtctcagctttacgcacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcaggcctcaagaccattgtg
ggggccctgatccagtctgtgaagaagctggccgacgtgatggtcctcacagtcttctgc
ctcagcgtctttgccctcattggcctgcagctcttcatgggtaacctgaggcacaagtgt
gtgcgcaacttcacggcgctcaacgataccaacggctctgtggaggctgatggcctggtc
tgggaatcgctggacctctacctcaacgacccagaaaattacctgctcaagaatggcact
tctgacgtgttactgtgtgggaacagctctgatgctgggacgtgtcccgagggctaccgg
tgcctcaaggcaggcgagaaccctgaccacggctacaccagcttcgactccttcgcctgg
gccttccttgcactcttccgtctgatgacgcaggactgctgggagcgtctctaccagcag
accctgaggtccgcagggaagatctacatgatcttcttcatgcttgtcatcttcctgggc
tccttctacctggtgaacttgatcctggctgtggttgccatggcctacgaggagcaaaac
caagccaccatcgctgagactgaggagaaggaaaagcgcttccaggaagccatggagatg
ctcaagaaagagcatgaggctctcaccataaggggtgtggacactgtgtctcgcagctcc
ttggagatgtcccctttggccccagtaaccacctgtgagagaaggagcaagaggagaaaa
cgaatgtcttcagggacggaggagtgtggggatgacaggttccccaagtccgactcggag
gatggtcccagagcaatgaatcgtctcagcatctcccacgggctcagcaggacctccatg
aagcaacgctccagccgcgggagcattttcacctttcgccggcgagacctgggctccgaa
actgattttgcagatgatgaaaacagcacagcaggggacagcgagagccaccgcacatcg
ctgctggtgccctggcccctgcgccggcctagtgccctgggacaacccagtcccgggacc
tcagctcccagccacgccctcaatggcaaaaggaacagcaccgtggactgcaacggggtg
gtctccttgctgggggcaggcgaccctgaggccacctccccaggaagccgcctcctccgc
cctataatgctggagcgccccccagacacgaccacaccgtcggaggagccaggcaggccc
cagatgctgagcccccaggctccgtgtgcggatggcttcgaggagccaggagagcggcaa
cgggccctcagcgctgtcagtgtcctcaccagcgtcctggaagagctggaggagtctcac
cgcaagtgtccaccatgctggacccgcttcgcccagcgctacctgatctgggagtgctgc
cccctgtggatgtccatcaagcagagagtgaagttcatggtcatggacccatttgctgat
ctcaccatcaccctgtgcatcgtgattaacacgctcttcatggcgctggagcactacaac
atgacaactgaattcgaggagatgctgcaggtcggaaacctggtcttcacagggatcttc
acagcagagatgaccttcaagatcattgctctcgacccctactactatttccagcagggc
tggaacatcttcgacagcatcatcgtcatcctcagcctcatggagctgggcctgtcccgc
atgggcaacctgtcggtgctgcgttccttccgcctgctgcgtgtcttcaagctggccaaa
tcatggcccaccctgaacacactcatcaagatcatcgggaactcagtgggggcgctggga
aacctgacactggtgctggccatcatcgtgttcatctttgccgtggtgggcatgcagctc
tttggcaaaaactactcggagctcaggtaccgcatcagtgactcaggcctgctgccccgc
tggcacatgatggacttcttccatgcctttctcatcatcttccgcatcctctgtggcgag
tggatcgagactatgtgggactgcatggaggtgtctgggcagtcgctgtgcctgctggtc
ttcttacttgttatggtcattggtaaccttgtggtcctgaacctcttcctggctttgctg
ctcagctccttcagtgcagacaacctcacagcccctgacgaggacggggagatgaacaac
ctccagctggccttggcgcgcatccagcggggcctgcgctttgtcaagcggaccacctgg
gacttctgctgtggactcctgcagcagcggcctcagaagcctgcagcccttgccacccgt
gaccagctgcccagctgcattgccacctccggctcgccacagcctccagagacagagaag
gcacctccagcccgcaaggagacacggtttgaggaaggcaatcggccaggccagggcacc
cctggggatccggagcctgtgtgtgtgcccattgccatggctgaatcagacacggatgac
caagaggaggaagaggagaatagcctgggcacagaggaagagtccagcaagcaggaatcc
catcctgtgtctggcggccaagaggccctcccagagcccagggcctggagccaggtgtca
gagaccacctcctccgaggcctatgaggccagtgctgctccggcagaaaggcggcagcag
cggcaagcggagcccccggccccagggtgcagtgagacccaagaggacagttactctgaa
gggagcacagcagacatgaccaacactgctgaccttatggagcagatccctgacctcggt
gaggacgtcaaggatccggaggactgcttcaccgaaggctgtgtccgacgctgtccctgc
tgcactgtggacaccacgcagggcccagggaaggtctggtggcagctgcgcaagacctgc
taccgcattgtggagcacagctggtttgagacattcatcatcttcatgatcctgctcagc
agtggagcactggcctttgaggacatctacctggaggagaggaagaccatcaaagtcctg
ctcgagtatgccgacaagatgttcacttacgtcttcgtgctcgagatgctgctcaagtgg
gtggcctacggctttaagaagtacttcaccaacgcctggtgctggctcgatttcctcatc
gtggatgtctcattgatcagcctggtggccaacaccctgggctttgctgagatgggcccc
atcaagtcgctgcggacgttgcgtgcgctccgacccctgcgagccttgtcccgctttgag
ggcatgagggttgtggtcaatgccctggtgggcgccatcccgtccatcatgaacgtcctc
ctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctattcgcaggg
aagtttgggaggtgcatcaaccagactgagggagacctgcctttgaactacaccatcgtg
aacaataagagcgactgtgagtctttcaacgtgactggcgaattgtactggaccaaggtg
aaagtcaactttgacaacgtgggggccgggtacctggcccttctgcaggtggcaacattt
aaaggctggatggacattatgtatgcagctgtggactccagggggtttgaagagcagccc
cagtgggaatacaacctctacatgtacatctacttcgtcatcttcatcatcttcgggtct
ttcttcaccctgaaccttttcatcggtgtcatcattgacaacttcaaccagcagaagaaa
aagttagggggccaggacatcttcatgacagaggagcagaagaagtactacaacgccatg
aagaagctgggctccaagaagccccagaagcccatcccaaggcccctgaacaagtaccag
ggcttcttatttgacattgtaaccaagcaggccttcgatgtcaccatcatgtttctcatc
tgcttgaacatggtgaccatgatggtggagacagatgaccagagccctgagaaggtcaac
atcttggccaagatcaacctgctctttgtagccatcttcacaggcgagtgtatcatcaag
atgactgccctgcgccactactacttcaccaacagctggaacatcttcgacttcgtggtt
gtcatcctctccatcgtgggcactgtgctctcagacatcatccagaagtacttcttctcc
ccaacactcttccgagtcatccgcctggcacgaattggccgcatcctcaggctgatccga
ggggccaaggggatccgcacgctgctctttgccctcatgatgtccctgcctgccctcttc
aacattggcctgctgctcttcctcgtcatgttcatctactccatctttggcatggccaac
tttgcttatgtcaagtgggaggctggcatcgatgacatgttcaacttccagacctttgcc
aacagcatgctgtgcctcttccagatcaccacatcggctggctgggatggtctcctcagc
cccatcctcaacacgggacccccctcttgtgaccccaatctgcccaacagcaatggctcc
cgggggaactgtgggagcccagctgtgggcatcctcttcttcaccacctacatcatcatc
tccttcctcatcgtggtcaacatgtacattgccatcatcctggagaacttcagcgtggcc
acggaagagagtaccgagcccctgagtgaggatgactttgacatgttctatgagatctgg
gagaagtttgacccagaggccacccagttcattgagtattcggccctgtccgactttgct
gatgccctgtctgagccactccgtatcgccaagcccaaccagataagcctcatcaatatg
gacctgcccatggtgagcggggaccgtatccattgcatggacatactctttgccttcacc
aagagggttctgggtgagtctggggagatggatgctctgaagatccagatggaggagaag
tttatggcggccaacccatccaagatctcctatgagcccatcaccaccacactgcggcgc
aagcatgaggaggtgtcggccacaatcatccagcgggctttccggaggcacctgctgcag
cgctccatgaagcatgcctcctttctcttccgccagcaggcgggcagcagcggcctctcc
gaagaggatgcccctgagcaagagggcctcattgcctacatgatgaatgagaacttctcc
cgacgccacggcccaccctccagctcctccatctcctccacgtccttcccaccctcctat
gacagtgtgaccagggccaccagcgataacctccaggcgagggtgtctgactacagccgc
agtgaagatctcgcagacttccccccgtccccagacagagaccgtgagtctatcgtgtga
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