Equus caballus (horse): 100053517
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Entry
100053517 CDS
T01058
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecb04121
]
100053517 (PDZRN4)
Enzymes [BR:
ecb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100053517 (PDZRN4)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100053517 (PDZRN4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100053517
NCBI-ProteinID:
XP_001914717
Ensembl:
ENSECAG00000000627
VGNC:
21295
UniProt:
F7CF34
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All DBs
Position
6:61013437..61348959
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AA seq
778 aa
AA seq
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MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRTPLSK
PAYGAAPEVQLMNASTQTDITFEHIMALTKLRPPTPPVPDICPFLLSDSCHSLHPMEHEF
YEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPN
SIAAKDGRIREGDRILQINGEDVQNRGEAVALLSSDECKRIVLLVARPEIQLDEGWLEDE
RNEFLEELNLEMLEEQHNEAMQRTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRT
DESLRNDESSEQENAAEDPNSTSLKSKRELGHSQDTLGSVELQCNESFVSGEYIDSDCTG
NQDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIEL
ECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQRGKLDDIIEHPEKSDKDSSSA
YNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAASQSSSGQSSKESTSTKAKTT
EQVCGIEGKEKISESNKLSDQEKAGSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQ
QKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKI
KEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSG
SEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcacttttcagaaaagagaggaacactacaaactgctgtatgaa
gtttcccaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagct
tttcggaatgccaaggagcccattgtggtccaggtgttaaggcgaacgcctctcagtaaa
ccagcctatggagcagccccagaagtgcagctcatgaacgccagtactcagacggacatc
acatttgaacacatcatggccctgaccaaactgaggccacctacccctccagtgccagat
atctgtccatttctgctctcagacagctgccattctcttcatccgatggaacatgaattt
tatgaggacaatgagtatctttccagcttgcctgctgatgcggacagaacagaggacttt
gaatacgaggaggtcgagttgtgtcgtgttagcagtcaagagaagctgggcctgacagtc
tgttaccgaacggatgatgaagaagacaccggcatttatgtcagcgaggtagatccaaat
agcattgctgccaaagatggccgaattcgagaaggagatcgcattttgcaaataaatggg
gaagatgtccagaatcgaggagaagcagtggcattgctgtctagcgatgagtgcaagaga
attgtgctgctggttgcaaggccagagattcagctggatgaaggctggctggaagatgaa
aggaatgaattcttagaggagttaaacttggagatgttggaagaacagcataatgaagca
atgcaacgcactgccaatgaggtggagcagccaaagaaacaagaagaagaagaaggtacg
acagacacagcaacatcctcatccaacaaccatgagaaggacagtggagtggggcgcacc
gacgaaagcttgcgaaatgatgagagctcggagcaggagaacgcagctgaggatcccaac
agcacatctttgaagagcaagagagagctggggcacagccaagacactctaggaagcgtt
gagcttcagtgcaatgagagcttcgtgtctggtgaatacattgactcagactgcactggc
aaccaggatgaggagtgtgaaaggttccggcagctcttggagctcaagtgcaagattcga
aaccatggagagtatgacctgtattactcgagcagcacaatagaatgcaatcaaggggaa
caagagggagtggagcatgagctacagttgcttaatgaagaactaagaaatattgaactc
gagtgccagaatatcatgcaggctcacaggctccagaaagtgacagaccagtatggagac
atctgggcactgcatgatggaggattccgaaattataacaccagcatagacatgcaaagg
ggaaagctagatgacatcatcgaacacccagaaaagtcagacaaggacagttctagtgct
tacaacacagctgaaagctgcagaagcactccgctcactgtggaccgttcccctgacagt
tcccttccaagaatgatcaacctcaccaataagaaaaacctgagaagcacaatggcagcc
agtcagtcctcctctggacagagcagtaaagagtcgacctcgaccaaagccaaaaccact
gaacaagtttgcggcattgaaggcaaggagaagatttcagaaagcaacaagctttctgat
caagagaaggcaggcagcgaacacatcccttacctctctccttatcacagctcctcatat
agatatgccaacatcccagcccacgcccggcattatcagagctacatgcagttaattcaa
cagaaatctgctgtcgagtatgcacagagtcagctcagtttggtgagcatgtgcaaggag
tctcagaagtgttcagagcccaagatggaatggaaggtgaaaattaggagcgacgggaca
cggtacataacaaagagaccagtgcgagaccggattctgaaggaacgtgccttaaagatc
aaggaggagcggagtggtatgacgacagacgatgacaccatgagcgagatgaaaatgggg
cgctactggagcaaagaggagagaaagcaacacctggttcgggccaaagagcagcgtcgg
cgccgagagttcatgatgcggagccggttagagtgtcttaaggagagtcctcagagcggc
agcgagggcaagaaggagatcaacatcattgaactgagtcacaaaaagatgatgaaaaag
agaaacaagaaaattttggacaactggatgacaatccaagaactgatgacccatggagcc
aagtctcctgatggcacacgagttcataatgcctttttgtcagtcaccaccgtatga
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integrated database retrieval system