KEGG   Equus caballus (horse): 100053517
Entry
100053517         CDS       T01058                                 
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X3
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
ecb  Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecb04121]
    100053517 (PDZRN4)
Enzymes [BR:ecb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100053517 (PDZRN4)
Ubiquitin system [BR:ecb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    100053517 (PDZRN4)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 100053517
NCBI-ProteinID: XP_001914717
Ensembl: ENSECAG00000000627
VGNC: 21295
UniProt: F7CF34
LinkDB
Position
6:61013437..61348959
AA seq 778 aa
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRTPLSK
PAYGAAPEVQLMNASTQTDITFEHIMALTKLRPPTPPVPDICPFLLSDSCHSLHPMEHEF
YEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPN
SIAAKDGRIREGDRILQINGEDVQNRGEAVALLSSDECKRIVLLVARPEIQLDEGWLEDE
RNEFLEELNLEMLEEQHNEAMQRTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRT
DESLRNDESSEQENAAEDPNSTSLKSKRELGHSQDTLGSVELQCNESFVSGEYIDSDCTG
NQDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIEL
ECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQRGKLDDIIEHPEKSDKDSSSA
YNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAASQSSSGQSSKESTSTKAKTT
EQVCGIEGKEKISESNKLSDQEKAGSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQ
QKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKI
KEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSG
SEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgggctgcaatttgtgcacttttcagaaaagagaggaacactacaaactgctgtatgaa
gtttcccaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagct
tttcggaatgccaaggagcccattgtggtccaggtgttaaggcgaacgcctctcagtaaa
ccagcctatggagcagccccagaagtgcagctcatgaacgccagtactcagacggacatc
acatttgaacacatcatggccctgaccaaactgaggccacctacccctccagtgccagat
atctgtccatttctgctctcagacagctgccattctcttcatccgatggaacatgaattt
tatgaggacaatgagtatctttccagcttgcctgctgatgcggacagaacagaggacttt
gaatacgaggaggtcgagttgtgtcgtgttagcagtcaagagaagctgggcctgacagtc
tgttaccgaacggatgatgaagaagacaccggcatttatgtcagcgaggtagatccaaat
agcattgctgccaaagatggccgaattcgagaaggagatcgcattttgcaaataaatggg
gaagatgtccagaatcgaggagaagcagtggcattgctgtctagcgatgagtgcaagaga
attgtgctgctggttgcaaggccagagattcagctggatgaaggctggctggaagatgaa
aggaatgaattcttagaggagttaaacttggagatgttggaagaacagcataatgaagca
atgcaacgcactgccaatgaggtggagcagccaaagaaacaagaagaagaagaaggtacg
acagacacagcaacatcctcatccaacaaccatgagaaggacagtggagtggggcgcacc
gacgaaagcttgcgaaatgatgagagctcggagcaggagaacgcagctgaggatcccaac
agcacatctttgaagagcaagagagagctggggcacagccaagacactctaggaagcgtt
gagcttcagtgcaatgagagcttcgtgtctggtgaatacattgactcagactgcactggc
aaccaggatgaggagtgtgaaaggttccggcagctcttggagctcaagtgcaagattcga
aaccatggagagtatgacctgtattactcgagcagcacaatagaatgcaatcaaggggaa
caagagggagtggagcatgagctacagttgcttaatgaagaactaagaaatattgaactc
gagtgccagaatatcatgcaggctcacaggctccagaaagtgacagaccagtatggagac
atctgggcactgcatgatggaggattccgaaattataacaccagcatagacatgcaaagg
ggaaagctagatgacatcatcgaacacccagaaaagtcagacaaggacagttctagtgct
tacaacacagctgaaagctgcagaagcactccgctcactgtggaccgttcccctgacagt
tcccttccaagaatgatcaacctcaccaataagaaaaacctgagaagcacaatggcagcc
agtcagtcctcctctggacagagcagtaaagagtcgacctcgaccaaagccaaaaccact
gaacaagtttgcggcattgaaggcaaggagaagatttcagaaagcaacaagctttctgat
caagagaaggcaggcagcgaacacatcccttacctctctccttatcacagctcctcatat
agatatgccaacatcccagcccacgcccggcattatcagagctacatgcagttaattcaa
cagaaatctgctgtcgagtatgcacagagtcagctcagtttggtgagcatgtgcaaggag
tctcagaagtgttcagagcccaagatggaatggaaggtgaaaattaggagcgacgggaca
cggtacataacaaagagaccagtgcgagaccggattctgaaggaacgtgccttaaagatc
aaggaggagcggagtggtatgacgacagacgatgacaccatgagcgagatgaaaatgggg
cgctactggagcaaagaggagagaaagcaacacctggttcgggccaaagagcagcgtcgg
cgccgagagttcatgatgcggagccggttagagtgtcttaaggagagtcctcagagcggc
agcgagggcaagaaggagatcaacatcattgaactgagtcacaaaaagatgatgaaaaag
agaaacaagaaaattttggacaactggatgacaatccaagaactgatgacccatggagcc
aagtctcctgatggcacacgagttcataatgcctttttgtcagtcaccaccgtatga

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