KEGG   Equus caballus (horse): 100071671Help
Entry
100071671         CDS       T01058                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3 isoform X3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
ecb  Equus caballus (horse)
Pathway
ecb03410  Base excision repair
Module
ecb_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:ecb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    100071671 (LIG3)
Enzymes [BR:ecb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100071671 (LIG3)
DNA repair and recombination proteins [BR:ecb03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100071671 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme Synaptonemal_3 HD_2
Motif
Other DBs
NCBI-GeneID: 100071671
NCBI-ProteinID: XP_014597354
Ensembl: ENSECAG00000016416
VGNC: 19664
LinkDB All DBs
Position
11
AA seq 954 aa AA seqDB search
MTLAFKILFPPVFRALSRREPCLFREHHWPDTRQFSQWSETDLLHGRCLLHRRKPFLSFQ
EGSLRPCATCFVSLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDITELEGWEELEDNEKEQISQH
IADLSSKAASTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEAH
SRPTPKRSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NEVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKAADLADMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIREDKDWKSATNLPQLKELYQLSKEKADFTV
VAGDEGSSTTGGSNGENEGTSGPAVSCKAPRASPKQPSTSAKKAGGKLSSPNSKGGSKPT
AKPSPVKGGQKLVTESSPLKTGEKRKAPDETPCQTKRPPPSEQRGRRAVPAGRR
NT seq 2865 nt NT seq  +upstreamnt  +downstreamnt
atgactctggctttcaagatcctcttcccaccagtcttccgtgccctcagccgaagagaa
ccctgcctgttccgagaacatcactggcctgacacaagacagttcagccagtggtcagaa
acagacctgcttcatgggcgctgcctcctccacagaagaaagccatttctgtcattccag
gaaggcagtctaagaccgtgtgccacctgctttgtttccttgccagggtcgcatgtggga
ctctgcagtggcccctgtgagatggctgagcagcggttctgtgtggactatgccaagcgt
ggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggggtgtgccgcatcggc
aaagtagtgcccaatcccttctcggagtctgggggtgatatgaaagagtggtaccacatc
aaatgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaatcgaggacatc
acggagctggaaggctgggaagagctggaagataatgagaaggaacagataagccagcac
attgcagatctgtcttctaaggcagcaagcacaccaaagaagaaagctgttgtccaggct
aagctgacggccactggccaggtgacatctccagtgaaaggtgcctcgtttgtcaccaat
acgaatccccggaaattttctggcttttcagccaagcccaacaactctggggaagcccac
tcaagacctacccctaagagaagtctgtcctcaagcaagtgtgaccccaagcataaggac
tgtctgctgcgtgagtttcggaagttgtgtgccatggtggctgaaaatcccagctacaac
acaaagacccagatcatccaggacttccttcggaaaggctcggcaggagatggtttccat
ggtgacgtgtacctaacagtgaagctgctgctgccgggtgttattaaaagtgtttacaac
ttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaacccagatgac
atggcacgagacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtctttccccccagctgccaagagcctccttactatccaggaggtggacgaattc
ctcctgcagctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggacatc
gcctccaggtgtacagccaatgaccttaagtgcatcatcaggttgatcaaacatgatctg
aagatgaactcaggtgcaaaacacgtgttagatgcccttgaccccaatgcctatgaagcc
ttcaaagcctcacgcaacctgcaagacgtggtggagcgggtcctccgcaacgagcaggag
gtggagaaggagcccggccagagacgggctctgagtgtccaggcctcgctcatgaccccg
gtgcagcccatgctggcggaggcctgcaagtccatcgagtatgcgatgaagaagtgtcct
aatggcatgttctctgagatcaagtacgatggggagcgagtccaggtgcataagaacggg
gaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtggcccac
tttaaggactacatcccccaggcgttccctggaggccacagcatgatcttggactctgag
gtgctcctgattgacaacaagacaggcaaaccactgccctttgggactctgggagtgcac
aagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgtatttacttc
aatgaggtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgataac
atggttgaaattcccaaccggatcatgttctcagaaatgaagagagtcacgaaagctgca
gacttggccgacatgataaaccgggtgatccgagaagggttggaagggctggtgctgaag
gacgtgaagggtacatatgagcctggaaagcggcattggctgaaagtgaagaaagactat
ttgaacgagggggccatggctgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttcctcatgggctgctacgacccaagcagc
cagaagtggtgcacagtcaccaagtgttcaggaggccatgatgatgcaacgctcgcccgc
ctgcagaaggaactggacatggtgaagatcagcaaggatcccagcaagatacccagctgg
ctgaaaatcaataagatctactatcctgacttcatcgtcccagacccaaagaaagctgcc
gtgtgggagatcacaggggccgagttctccaaatctgaggctcacaccgccgatgggatc
tccatccgattccctcgctgcacccgaatccgtgaagataaggactggaaatctgccact
aacctcccccagctcaaggaactgtaccagctgtccaaggagaaggcggacttcactgta
gtggccggagatgaggggagctccaccacagggggcagcaatggagagaatgagggcacc
tcggggcctgctgtgtcgtgcaaggcccccagagcctcccccaagcagccctccactagt
gccaagaaggcgggagggaagctgagtagccccaacagcaaaggcggcagcaagcccact
gcaaagccatcccctgtgaaagggggacagaagctggtcacagagtcttctcccttgaaa
acgggggagaagcggaaggctcctgatgagaccccatgccaaacaaagaggccgccaccc
agcgagcagagaggaaggagagctgtgccagcaggcaggcgatag

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