Enterobacter hormaechei subsp. hoffmannii ECR091: ECR091_01415
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Entry
ECR091_01415 CDS
T03378
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eclc
Enterobacter hormaechei subsp. hoffmannii ECR091
Pathway
eclc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eclc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECR091_01415 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclc03021
]
ECR091_01415 (rpoB)
03400 DNA repair and recombination proteins [BR:
eclc03400
]
ECR091_01415 (rpoB)
Enzymes [BR:
eclc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECR091_01415 (rpoB)
Transcription machinery [BR:
eclc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECR091_01415 (rpoB)
DNA repair and recombination proteins [BR:
eclc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECR091_01415 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AIN26354
LinkDB
All DBs
Position
285897..289925
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQEEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggcctggaagcagccttccgttccgtgttcccgattcag
agctacagcggtaattccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacggacaacggtactttcgttatcaacggt
actgagcgtgttatcgtttcccagctgcaccgtagcccgggcgtcttcttcgacagcgat
aaaggtaaaacgcactcttccggtaaagtactgtataacgcacgcatcattccttaccgt
ggttcatggctggacttcgaattcgatccaaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgcctgcaaccatcattctgcgtgcactgaactataccactgagcagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagttgcagatggag
ttggtgccggaacgtctgcgtggtgagaccgcgtcgttcgacatcgaagccgacggcaaa
gtgtatgtggaaaaaggtcgccgtatcaccgcgcgccacatccgccagctggaaaaagat
gatatcaaacacatcgaagttccggttgaatacattgcaggaaaagtagccgcgaaagat
tacgttgatgaatcaactggcgagctgatctgcccggcgaacatggagctgagcctggat
ctgctggctaagctgagccagtctggacacaaacgtatcgaaacgctgttcaccaacgat
ctggaccacggtccgtacatctctgagactgtacgcgtcgacccaaccaacgatcgtctg
agcgcgctggttgaaatctaccgcatgatgcgtcctggtgagccaccaactcgcgaagcg
gctgaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggta
ggtcgtatgaagttcaaccgttctctgctgcgcgacgagatcgaaggttccggtatcctg
agcaaagacgacatcattgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgctccgtaggcgaaatggcg
gaaaaccagttccgcgttggcctggttcgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgcg
gcagtgaaagagttcttcggttccagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagatcacgcacaaacgtcgtatctctgcactcggcccaggcggtctgacccgt
gaacgtgcaggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
acaaacgaatacggtttccttgagaccccgtatcgtaaagtgaccgacggtgtggttacc
gacgaaattcattacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatccagcctgttcagccgcgaccaggttgactacatggacgtatccacccaacaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgtgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttacagcagttgctaagcgt
ggcggtaccgttcagtacgttgacgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagcgggcatcgacatctacaacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccttgcgtatctctgggtgagccagttgagcgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtctccgag
cgtgtggttcaggaagatcgtttcaccaccatccacattcaggaactggcctgtgtgtcc
cgtgacaccaagctggggccagaagagatcactgccgacatccctaacgtgggtgaagct
gcgctctccaaactggatgaatccggtattgtttacatcggtgcggaagtgaccggcggc
gacattctggttggtaaggttacaccgaaaggcgaaacccagctgacgccagaagagaaa
ctgctgcgtgctatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgacgttcaggtcttcactcgtgacggcgttgag
aaagataagcgtgcgctggaaatcgaagagatgcagctcaaacaggctaagaaagacctg
tctgaagaactgcaaatcctcgaagcgggtctgttcagccgtatctatgcggtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgccacgcgatcgctggctggagctg
ggcctgaccgacgaagagaaacagaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccaggcgtgctgaagattgttaaggtgtatctggctgttaaacgtcagatc
cagcctggtgacaagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaaccca
ctgggtgtaccgtctcgtatgaacatcggtcagatcctggaaacccacctgggtatggct
gcgaaaggtatcggcgacaagattaacgccatgctgaagcagcaggaagaagtcgcgaaa
ctgcgcgagttcatccagcgtgcctacgatctgggtaccgacgtgcgtcagaaagtcgac
ctgaacaccttcagcgatgatgaagttctgcgtctggcggaaaacctgcgtaagggtatg
ccaattgcaacgccggtattcgacggtgcaaaagaagctgaaattaaagagctgctgcaa
ctgggtggtctgccaacgtctggtcagattacgctgtttgacggccgtaccggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaagatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcagcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaatggt
cgtactaagatgtataagaacatcgttgacggcaaccatcagatggaaccgggcatgcca
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
