Enterobacter hormaechei NCTC 9394: ENC_05540
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Entry
ENC_05540 CDS
T02615
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
eclo
Enterobacter hormaechei NCTC 9394
Pathway
eclo02020
Two-component system
eclo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eclo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ENC_05540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ENC_05540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclo03021
]
ENC_05540
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
eclo02035
]
ENC_05540
Transcription machinery [BR:
eclo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ENC_05540
Bacterial motility proteins [BR:
eclo02035
]
Flagellar system
Flagellar assembly proteins
Stator
ENC_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Rv2175c_wHTH
UPF0147
Sacchrp_dh_C
TFIIE_alpha
SapB_1
Motif
Other DBs
NCBI-ProteinID:
CBK84571
LinkDB
All DBs
Position
586105..586794
Genome browser
AA seq
229 aa
AA seq
DB search
MDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVDRYDALQGTAFTTY
AVQRIRGAMLDELRSRDWVPRSVRRNAREVAHAMGQLEQELGRNATETEVAERLGIPVEE
YRQMLLDTNNSQLFSYDEWREEHGDSIELVTDEHQQENPLHHLLEGNLRQRVMEAIEALP
EREQLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggataaacactcgctgtggcagcgttatgttccgctggtgcgtcacgaagcattgcgc
ctccaggtgcgtttgccggcgagcgtggaactggacgatctgctacaggcgggcggtatc
gggttattgaatgcagttgaccggtacgacgctctgcaaggaacggcatttacgacttac
gcagtgcagcgtattcgtggtgcgatgctggacgagctgcgcagccgcgactgggtgccg
cgcagcgttcgccgcaacgcgcgcgaagtggcgcatgcgatggggcagctggaacaggag
ctggggcgcaacgcgacggaaaccgaagtagcggagcgtctgggcattcctgttgaagag
tatcgccagatgttgctcgataccaataacagccaactcttctcttatgatgagtggcgc
gaagagcatggcgatagcatcgagctggtgacggatgaacaccagcaagaaaacccgtta
caccatttactggaagggaatttacgccagcgcgtgatggaagcgattgaagctttaccg
gaacgtgagcaactggtgttaaccctctattaccaggaagagctcaatctcaaagagatt
ggcgccgtgctggaggtgggcgagtctcgggtgagccagctgcacagccaggccattaaa
cgcctgcgcacaaaactgggtaagttatag
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