Enterobacter hormaechei subsp. xiangfangensis: LI66_19870
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Entry
LI66_19870 CDS
T03707
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eclx
Enterobacter hormaechei subsp. xiangfangensis
Pathway
eclx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eclx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI66_19870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eclx03019
]
LI66_19870
03009 Ribosome biogenesis [BR:
eclx03009
]
LI66_19870
Enzymes [BR:
eclx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LI66_19870
Messenger RNA biogenesis [BR:
eclx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LI66_19870
Ribosome biogenesis [BR:
eclx03009
]
Prokaryotic type
rRNA helicases
LI66_19870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJB83500
LinkDB
All DBs
Position
complement(4157445..4159340)
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AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEAELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRENRGPRREEGASRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaaccgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgcgcgccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgctgaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggtccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggatctctctaaactgagcggcctggtactggacgaagccgatgaa
atgctgcgtatgggcttcatcgaagacgtagaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaactatgccagaagcgatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgcattcagtccagcgtgaccactcgcccggacatc
agccagagctactggtctgtatacggcatgcgcaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggcctggacgttgagcgtatcagcctggttgtaaactac
gatatcccaatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggg
cgtgcgggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcaccatgaagctgaccattccagaagctgagctgccaaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcactgctgtcccagatccagcctgtcgctgaaggcgaagagctggac
atggaaaccctggccgcagcactgctgaaaatggcgcagggcgaacgtagcctgatcgtg
ccacctgatgcgccgatgcgtcctaagcgtgagttccgtgaccgtgacgatcgtttcgaa
cgtcgtggcgaccgtaacgaccgtggtccacgcggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgcgagcgtcgtgacgctggcgaaatggaactgtatcgcattgaagtg
ggccgtgatgatggtgttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgttcggttcccactccaccatcgagctg
ccaaaaggcatgccgggcgaagtactgcaacactttactcgcacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgtggcggcgaacgt
cgtggcggtggtcgcggtttcggtggcgagcgtcgtgaaggcggtcgcagcgaaggtcgc
ggtggtgaaggccgtcgtttctccggcgagcgccgcgaaaaccgtggtccacgccgtgaa
gaaggtgccagccgtcgtcgtttcggtgacgcgtaa
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