KEGG   Escherichia coli SMS-3-5 (environmental): EcSMS35_4938
Entry
EcSMS35_4938      CDS       T00672                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
ecm  Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:ecm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecm03400]
    EcSMS35_4938 (radA)
DNA repair and recombination proteins [BR:ecm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     EcSMS35_4938 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Rubredoxin_2 ChlI DnaB_C Lon_C RecA Rad51 GvpD_P-loop ABC_tran AAA_22 SLFN-g3_helicase AAA_14 AAA_16 AAA_24 nSTAND3 AAA NTPase_1 Zeta_toxin cobW AAA_29 Viral_helicase1 AAA_5 Thio2_N DZR AAA_30 Herpes_Helicase PAXNEB
Other DBs
NCBI-ProteinID: ACB16962
UniProt: B1LEJ4
LinkDB
Position
5052799..5054181
AA seq 460 aa
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
NT seq 1383 nt   +upstreamnt  +downstreamnt
gtggcaaaagctccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgct
gcgtcgccaacggtggcgcgtaacgagcgtctcagtggctatgccggtagcgccggagtg
gcaaaagtccagaaactctccgacatcagccttgaggagctgccgcgtttttctaccgga
tttaaagagttcgaccgcgtattaggcggcggggtggtgccgggaagcgccattctgatt
ggcggtaacccaggtgcggggaaatccacgctgctgttgcaaacgctgtgcaaactggcc
cagcagatgaaaacgctgtatgtcaccggcgaagagtcgctgcaacaggtggcaatgcgc
gctcatcgccttggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgag
cagatctgcctgattgccgaagaagagcaaccgaagctgatggtaattgactccatccag
gtgatgcatatggcggatgtacaatcatcgcctggcagcgtggcgcaggtgcgtgaaacg
gcggcttatctgacgcgcttcgccaaaacgcgcggtgtggcgattgtcatggttgggcac
gtaaccaaagatggctcgctggctggccctaaagtgctggaacactgtatcgactgttcg
gtgcttctggatggcgatgccgactcccgttttcgcaccttacgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggcgtcttcgcaatgaccgaacagggtctgcgtgaagtc
agcaacccttcggcaatctttttaagccgcggtgatgaagtgacctcgggtagctcagtg
atggtagtgtgggaaggaacgcgtccgctgctggtggagattcaggcgctcgtcgatcac
tcgatgatggcgaatccacgccgcgtggcagtcgggctggagcaaaaccgtctggcaatc
ctgctggcggtgcttcaccgtcacggtggtctacaaatggccgatcaggatgtgtttgtt
aacgtggtcggtggcgtgaaggtgacggaaaccagcgccgacttagcgttactgctggcg
atggtttccagcctgcgcgacagaccgctgccgcaggatctggtggtgtttggtgaagtc
gggctggcaggggagatccgcccggtgcccagcggtcaggaacgtatctcagaagcggcg
aaacatggttttcggcgggcgattgttccggcggctaacgtgccgaaaaaagcgccggaa
gggatgcagatttttggcgttaaaaaactctccgacgcgcttagcgtgttcgacgactta
taa

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