Escherichia coli K-12 MG1655: b1835
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Entry
b1835 CDS
T00007
Symbol
rsmF
Name
(RefSeq) 16S rRNA m(5)C1407 methyltransferase
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eco03009
]
b1835 (rsmF)
Enzymes [BR:
eco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
b1835 (rsmF)
Ribosome biogenesis [BR:
eco03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
b1835 (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
PCMT
Ubie_methyltran
TRM
TruB-C_2
Motif
Other DBs
NCBI-GeneID:
946348
NCBI-ProteinID:
NP_416349
Pasteur:
yebU
RegulonDB:
ECK120003595
ECOCYC:
G7008
ASAP:
ABE-0006106
UniProt:
P76273
Structure
PDB
LinkDB
All DBs
Position
1920223..1921662
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AA seq
479 aa
AA seq
DB search
MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY
GWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQR
VMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF
GAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG
TLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDC
EGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAATGVGLNWDENLRLWQR
DKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNMNAFELTPQE
AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGNA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaacacaccgtttatttcccggacgcctttctgacacaaatgcgcgaagcgatg
ccttcgacgctctcatttgatgattttcttgccgcctgtcagcgcccgttgcgccgcagc
attcgcgttaatacgctgaaaatctccgttgctgatttcctgcaattaaccgctccttat
ggctggacgcttacgccaattccgtggtgtgaagaaggtttctggattgaacgcgacaat
gaagatgcattgccattgggtagtaccgccgagcatttaagtggcctgttttatattcag
gaagccagttcaatgttgcctgttgccgccttgtttgctgacggtaatgcaccacagcgg
gtgatggatgtcgctgccgcgcctggctccaaaacgacgcaaatttccgcgcggatgaat
aacgaaggggcaatccttgccaatgagttttccgccagtcgggtaaaagtgttacatgcc
aatatcagccgctgtggtatcagtaatgttgcgctcacacattttgatggccgcgtgttt
ggtgcggcagtgccagaaatgttcgatgccattttgctggacgctccctgctctggcgaa
ggcgtggtgcgtaaagatcccgatgcgctaaaaaactggtcaccagaaagcaatcaggaa
atcgcagctacacaacgggagcttatcgacagcgcctttcatgcattacgtcctggtggt
acgctggtttactcgacctgtaccttaaaccaggaagaaaacgaagccgtttgcctgtgg
ctgaaagagacttaccccgacgcagtagagtttttaccacttggcgatctcttccctggt
gcaaacaaagcgctgaccgaagaaggctttttgcatgttttcccacaaatttacgactgc
gaaggcttcttcgttgctcgtctgcgtaaaactcaggcgattcccgccttacccgccccc
aaatacaaagtcggtaattttccgttcagcccggtgaaagatcgcgaagctggacaaatt
cgtcaggcggctacaggtgttggcttaaactgggatgaaaacctgcgcctctggcagcgt
gacaaagaactgtggttgttcccggtgggcattgaagccctgatcggtaaagtccgattt
tctcggttggggattaaacttgccgagacgcacaacaaaggttatcgctggcagcatgaa
gcggttattgctcttgcctcacccgataatatgaatgcattcgagctgacaccgcaggaa
gcggaggagtggtatcgcgggcgcgatgtttacccgcaagccgcgccagtggcggatgat
gtattggttactttccagcatcaaccgattggtttagccaaacggattggttcgcgattg
aaaaacagctatccgcgtgaactggtgcgcgatgggaaactttttaccggtaacgcctga
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