KEGG   Escherichia coli APEC O78: APECO78_13785Help
Entry
APECO78_13785     CDS       T02445                                 

Gene name
dacD
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
ecoa  Escherichia coli APEC O78
Pathway
ecoa00550  Peptidoglycan biosynthesis
ecoa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ecoa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    APECO78_13785 (dacD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ecoa01002]
    APECO78_13785 (dacD)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ecoa01011]
    APECO78_13785 (dacD)
Enzymes [BR:ecoa01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     APECO78_13785 (dacD)
Peptidases and inhibitors [BR:ecoa01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   APECO78_13785 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:ecoa01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   APECO78_13785 (dacD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID: AGC87484
LinkDB All DBs
Structure
PDB: 

Position
complement(2832762..2833928)
Genome map
AA seq 388 aa AA seqDB search
MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPQIHAGSWVLMDYTTGQILTAGNEHQQRN
PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD
LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS
AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG
FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILLRGKKVGTERIW
YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEIELYDRDKQV
AHWPLVTLESVGEGGMFSRLSDYFHHKA
NT seq 1167 nt NT seq  +upstreamnt  +downstreamnt
ttgaaacgccgtcttattattgctgcttctttgttcgtttttaacttatcgtctggtttt
gcggcggaaaacattcctttttcacctcagcctccacagattcatgccgggtcctgggta
ctgatggattacaccaccggtcagatcctcaccgcgggtaatgagcatcaacagcgcaat
cccgccagcctgacaaagctgatgacgggttatgtcgtggatcgcgctatcgatagtcat
cgcattacgccagacgatattgtcaccgtggggcgcgatgcgtgggcgaaagataatccg
gtgtttgtcggttcttcactgatgtttttgaaagagggcgatcgcgtatcggtacgtgat
ttaagccgtggtttaattgtggattccggaaatgacgcttgtgttgctctggctgactat
attgccggtgggcaacggcagtttgttgaaatgatgaacaactatgccgagaagctgcat
ctcaaggatacgcattttgaaacagtgcatggtctggatgcacctggccagcatagctcg
gcttatgatttagctgtgctttctcgcgctatcatccacggcgagcccgagttttatcat
atgtacagtgagaaaagtctcacctggaacggtatcacccagcaaaaccgtaacgggttg
ttgtgggataaaaccatgaatgttgacggcctgaaaacgggtcatacttctggtgccggt
tttaacctcattgcttcggctgtagatgggcagcgtcgtctcattgcagtggtaatgggg
gctgacagtgcaaaaggtcgtgaggaagaggcaagaaaattactgcgttgggggcaacaa
aactttactacggtgcaaattttgctccgtgggaaaaaggtcggaacggaacgcatctgg
tatggcgataaagaaaatatcgacctgggaacggaacaagagttctggatggtgctaccg
aaagccgaaattccacatatcaaagccaaatatacccttgatggtaaagagctcaccgcg
ccaattagcgcccatcagcgggtaggggaaattgaactttacgaccgtgataaacaggtg
gcgcactggccgctggttaccctggaatctgtcggggaaggcggcatgttttcccgcctg
agtgattatttccaccataaggcctga

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