Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5033
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Entry
ECRM13516_5033 CDS
T03011
Name
(GenBank) adhesin AIDA-I precursor
KO
K12687
antigen 43
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECRM13516_5033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_5033
02044 Secretion system [BR:
ecoh02044
]
ECRM13516_5033
Transporters [BR:
ecoh02000
]
Other transporters
Pores ion channels [TC:
1
]
ECRM13516_5033
Secretion system [BR:
ecoh02044
]
Type V secretion system
Autotransporter-1 (AT-1) family
ECRM13516_5033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIDA
Autotransporter
AC_1
ESPR
Motif
Other DBs
NCBI-ProteinID:
AHG17619
LinkDB
All DBs
Position
complement(5002633..5005713)
Genome browser
AA seq
1026 aa
AA seq
DB search
MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADKVVQAG
ETVNDGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL
QRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG
AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ
VVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
MDYDRILAGSRSHQTGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA
DIVAQGTRHSMKASSDNNDFRVRGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
GQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFGKGTSSRDTLRGSAKHSVRELPVNWWVQ
PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGRSGRLCPQ
RQRQQR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacatctgaacaccagctacaggctggtatggaatcacattacgggcaccctg
gtggtggcctccgaactggcccgctcacggggaaaacgcgctggtgtggcggttgcgctg
tctcttgctgctgtcacatcagtcccggcactggctgctgacaaggttgtacaggcggga
gaaaccgtgaacgacggaacactgacaaatcatgacaaccagattgtcctcggtacggcc
aacggaatgaccatcagtaccggtctggagtatgggccggataacgaggccaataccggc
ggacaatggatacaaaatggcggtatcgccaacaacactactgtcaccggtggtggtctt
cagagagtgaatgccggaggaagcgtttcagacacggttatcagtgccggaggcggacag
agccttcaggggcaggcagtgaacaccactctgaacggcggtgagcagtgggtacatgaa
ggcgggattgcaacgggtaccgtcattaatgagaagggctggcaggccatcaaatccggc
gcagtggcaaccgacacggttgtgaataccggcgcggaagggggaccggatgcggaaaat
ggtgataccgggcagaccgtctacggagatgccgtacgcaccaccatcaataaaaatggt
cgtcagattgtggctgctgaaggaacggcaaataccactgtggtttatgccggcggcgac
cagactgtacatggtcacgcactggataccacgctgaatggggggtaccagtatgtgcac
aacggcggtacggcgtctggcactgttgtaaacagtgacggctggcagattgtcaaaaac
gggggtgtggccgggaataccaccgttaatcagaagggcagactgcaggtggacgccggt
ggtacagccacgaatgtcaccctgaagcagggcggcgcactggttaccagtacggctgca
accgttaccggcataaaccgcctgggagcattctctgttgtggagggtaaagctgataat
gtcgtactggaaaatggcggacgcctggatgtgctgaccggacacacagccactaatacc
cgcgtggatgatggcggaacgctggatgtccgcaacggtggcaccgccaccaccgtatcc
atgggaaatggcggtgtactgctggccgattccggtgccgctgtcagtggtacccggagc
gacggaaaggcattcagtatcggaggtggtcaggcggatgccctgatgctggaaaaaggc
agttcattcacgctgaacgccggtgatacggccacggataccacggtaaatggcggactg
ttcaccgccaggggcggcacactggcgggcaccaccacgctgaataacggcgccatactt
accctttccgggaagacggtgaacaacgataccctgaccatccgtgaaggcgatgcactc
ctgcagggaggctctctcaccggtaacggcagcgtggaaaaatcaggaagtggcacactc
actgtcagcaacaccacactcacccagaaagccgtcaacctgaatgaaggcacgctgacg
ctgaacgacagtaccgtcaccacggatgtcattgctcagcgcggtacagccctgaagctg
accggcagcactgtgctgaacggtgccattgaccccacgaatgtcactctcgcctctggt
gccacctggaatattcccgataacgccacggtgcagtcggtggtggatgacctcagccat
gccggacagattcatttcacctccacccgcacagggaagttcgtaccggcaaccctgaaa
gtgaaaaacctgaacggacagaatggcaccatcagcctgcgtgtacgcccggatatggca
cagaacaatgctgacagactggtcattgacggtggcagggcaaccggaaaaaccatcctg
aacctggtgaacgccggcaacagtgcgtcggggctggcgaccagcggtaagggtattcag
gtggtggaagccattaacggtgccaccacggaggaaggggcctttatccaggggaataag
ctgcaggccggtgcctttaactactccctcaaccgggacagtgatgagagctggtatctg
cgcagtgaaaatgcttatcgtgcagaagtccccctgtatgcctccatgctgacacaggca
atggactatgaccggattctggcaggctcccgcagccatcagaccggtgtaagcggtgaa
aataacagcgtccgtctcagcattcagggcggtcatctcggtcacgataacaacggcggt
attgcccgtggagccacgccggaaagcagcggcagctatggcttcgtccgtctggagggt
gacctgctcagaacagaggttgccggtatgtctgtgaccgcgggggtatatggtgctgct
ggccattcttccgttgatgttaaggatgatgacggctcccgtgccggcacggtccgggat
gatgccggcagcctgggcggatacctgaatctgatacacaacgcctccggcctgtgggct
gacattgtggcccagggaacccgccacagcatgaaagcctcatcggacaataacgacttc
cgcgtccggggctggggctggctgggttcgctggaaaccggtctgcccttcagtatcact
gacaatctgatgctggagccgcaactgcagtacacctggcagggactctccctggatgac
ggccaggataacgccagttatgtgaagttcgggcatggcagtgcacaacatgtgcgtgcc
ggcttccgtctgggcagccaccacgatatgaactttggtaaaggcacctcatcccgtgac
accctgcgcggcagtgccaaacacagtgtgcgtgaactgccggtgaactggtgggtacag
ccttctgttatccgcaccttcagctcccggggggacatgagcatgggtacagccgcagcc
ggcagtaacatgacgttctcaccgtcacagaatggtacgtcactggacctgcaggccgga
ctggaagcccgtgtccgggaaaatatcaccctggggcgttcaggcaggttatgtccacag
cgtcagcggcagcagcgctga
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integrated database retrieval system
