Escherichia coli LY180: LY180_01285
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Entry
LY180_01285 CDS
T02846
Symbol
pspF
Name
(GenBank) transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ecol
Escherichia coli LY180
Pathway
ecol02020
Two-component system
ecol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LY180_01285 (pspF)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LY180_01285 (pspF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ecol02022
]
LY180_01285 (pspF)
02035 Bacterial motility proteins [BR:
ecol02035
]
LY180_01285 (pspF)
Two-component system [BR:
ecol02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
LY180_01285 (pspF)
Bacterial motility proteins [BR:
ecol02035
]
Flagellar system
Flagellar assembly proteins
Others
LY180_01285 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_3
AAA_5
HTH_20
HTH_30
MCM
MerR
VRR_NUC
HTH_24
HTH_28
AAA_7
Motif
Other DBs
NCBI-GeneID:
16977932
NCBI-ProteinID:
AGW07704
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All DBs
Position
285900..286886
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AA seq
328 aa
AA seq
DB search
MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENENAPYIG
VNCAAIPENMLEATLFGYDKGAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILR
VLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFREDLYYRLAVIPITMPPLRER
LNDIIPLAESFIKKYSTVLVKNITLSESTRRAMLNYRWPGNVRQLENAIQRGMILNRDGV
IYPDALGLPENDIADHSELQWPAQPAVHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSK
IADLLGITPRALRYRLASMRKHGIEVFS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacttattgcaactgccgcttccagcattaacgcttttactctggcaaagcgt
gtcgccgcatttaacgtgccggtgctcattcagggcgaaaccggcgcgggcaaagagtgc
gtggcgaaatatattcacacagtcgcctttggtgaaaatgaaaacgcgccctatatcggc
gtgaactgcgctgcgatcccggaaaacatgctggaagcaaccttatttggctacgacaaa
ggcgcatttaccggcgcaattgccagtgtgccaggaaaaatggaactggcgaataacggc
accttattactcgatgaaattggcgatatgccgctggcgttacaggccaaaatattacgc
gtattgcaggaacaacaggttgagcgattaggcagcaaccgacaaattaaactcaatttt
cgcctgattgcctgcaccaataaaaaccttgagcaggaagtcgccgccgggcgttttcgt
gaagatctctattatcgtctggcggttattcctattaccatgccgccgctgcgtgaacgt
ctgaacgatattattccgctggcagagtcatttataaaaaaatactccacggtgctggtg
aaaaatatcaccctttcagaatctacccgccgtgcgatgctgaattaccgctggcccggc
aatgtgcgccagctggagaacgccattcagcggggaatgattttaaatcgcgacggcgtg
atttacccggacgccttaggcctgccggaaaatgacattgccgaccacagcgaactgcaa
tggcctgctcagcccgccgtacacattgccgaaaccagcgatttaggccagcacggacga
agcgcccagtatcaatatatcgctgacctgatgcgtaaatatcagggcaaccgcagcaaa
atcgccgacctgttaggtattaccccgcgcgcactgcgctatcgactggcctccatgcgc
aagcacggtatcgaagttttctcctga
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