KEGG   Escherichia coli LY180: LY180_02545
Entry
LY180_02545       CDS       T02846                                 
Name
(GenBank) transcriptional regulator
  KO
K03530  DNA-binding protein HU-beta
Organism
ecol  Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:ecol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecol03032]
    LY180_02545
   03036 Chromosome and associated proteins [BR:ecol03036]
    LY180_02545
   03400 DNA repair and recombination proteins [BR:ecol03400]
    LY180_02545
DNA replication proteins [BR:ecol03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LY180_02545
Chromosome and associated proteins [BR:ecol03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LY180_02545
DNA repair and recombination proteins [BR:ecol03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LY180_02545
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 SeleniumBinding HU-CCDC81_euk_1
Other DBs
NCBI-GeneID: 16978183
NCBI-ProteinID: AGW07887
LinkDB
Position
533281..533553
AA seq 90 aa
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcg
gctggccgtgcgttagatgctattattgcttccgtaactgaatctctgaaagaaggggat
gatgtagcactggtaggttttggtacttttgccgttaaagagcgtgctgcccgtactggc
cgcaacccgcagaccggtaaagagatcaccatcgctgctgctaaagtaccgagcttccgt
gcaggtaaagcactgaaagacgcggtaaactaa

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