Escherichia coli LY180: LY180_02545
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Entry
LY180_02545 CDS
T02846
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
ecol
Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecol03032
]
LY180_02545
03036 Chromosome and associated proteins [BR:
ecol03036
]
LY180_02545
03400 DNA repair and recombination proteins [BR:
ecol03400
]
LY180_02545
DNA replication proteins [BR:
ecol03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LY180_02545
Chromosome and associated proteins [BR:
ecol03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LY180_02545
DNA repair and recombination proteins [BR:
ecol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LY180_02545
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SeleniumBinding
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-GeneID:
16978183
NCBI-ProteinID:
AGW07887
LinkDB
All DBs
Position
533281..533553
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcg
gctggccgtgcgttagatgctattattgcttccgtaactgaatctctgaaagaaggggat
gatgtagcactggtaggttttggtacttttgccgttaaagagcgtgctgcccgtactggc
cgcaacccgcagaccggtaaagagatcaccatcgctgctgctaaagtaccgagcttccgt
gcaggtaaagcactgaaagacgcggtaaactaa
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