Eikenella corrodens: SAMEA4412678_0337
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Entry
SAMEA4412678_0337 CDS
T05039
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA4412678_0337 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_0337 (xseA)
Enzymes [BR:
ecor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAMEA4412678_0337 (xseA)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAMEA4412678_0337 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Glyco_tran_WecG
RecJ_OB
COG6_N
Lipase_GDSL_2
CemA
Motif
Other DBs
NCBI-ProteinID:
SNW06882
UniProt:
A0A8B4G1I4
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All DBs
Position
1:324715..326067
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AA seq
450 aa
AA seq
DB search
MSDLFAPAALSVSELNHLAKNLLEDQLAGLWVGGEVSNLVKAASGHYYFVLKDQRAQVRC
TLFKHAARSLAALLREGEEVEVLGKITLYEARGEFQINVQEVRRKGLGQLFEAYERLKQR
LQAEGLFDAARKRPLPAAPQCIGVVTSLAAAALRDVVTTLRRRAPDVRVVVYPTAVQGAG
SEFQVASAIAAAAEHAQADVLIVCRGGGSIEDLWAFNEEAAVRAVAASPLPVVSGVGHET
DFTLTDFAADVRAPTPTAAAELASPNRAEQLDKMCRLHSHMRHTLQRRCTDAAQRLDWHA
AQLRHPRQKWQEQQTGLLRSRQMLADHMLRHLHRKQEQLAYLAELCRRSRPQVQTATRQL
HTQAAQLNRHMAALLAQKQAQCQKQAGILDALSPQHTLSRGYSVITDRTGKVVRDAGRLH
SGQVLQLHFETGTAKAQVLPQRTGQQDLFD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctattcgcccccgccgcgctttctgtttccgagctcaaccatttggccaaa
aacctgctggaagaccagcttgccgggttgtgggtgggtggagaggtgtcgaatttggtg
aaggcggcgagcgggcactattattttgttttaaaagaccaacgcgcccaggtgcgctgc
actttgtttaagcatgccgcccgttcgctggccgcgctgctgcgcgagggcgaggaagtg
gaggtgttgggcaaaatcacgctgtatgaggcgcgcggggaatttcagattaacgtgcag
gaagtgcggcgcaaggggctggggcagctgtttgaggcttatgagcggctgaagcagcgt
cttcaggcggaaggcttgttcgatgcagcacgcaaacggcctctgcctgccgcgccgcag
tgcatcggcgtggtcaccagcctagcagcggcggcattgcgcgatgtggtcaccacgttg
cggcggcgtgcgccggatgtgcgcgtggtggtatatcccacagcggtgcagggcgcgggc
agcgagtttcaggtagcctcggctattgcagcggcggcggaacacgcgcaggcggatgtg
ctgattgtgtgccgtggcgggggcagcattgaggatttgtgggcgtttaacgaagaagcg
gcggtgcgcgcggtggcggcatcgccgcttccggtggtaagcggggtggggcacgaaacc
gatttcacgctcacggatttcgccgccgacgtgcgcgcgcccacgcccaccgccgccgcc
gagctggccagcccgaaccgtgcggagcagctggacaaaatgtgccgcctgcacagccat
atgcgccacacgctgcaacggcgctgcacagacgcggcgcaacggcttgactggcatgcc
gcacagttgcgccatccacgccagaaatggcaggaacagcagaccggcttgttgcgcagc
cgccaaatgctggctgaccatatgctgcgccacctgcaccgcaaacaggagcagctggcc
tatttggccgagctgtgccgccgcagccggccgcaagtacaaaccgctacgcggcagctg
cacacacaggcggcacaactcaaccgccacatggccgcgctcttggcgcaaaaacaagcg
caatgccaaaagcaggcgggcattttggatgccctctcgccgcaacacacgctatcgcgc
ggctatagcgtgattaccgaccgtacaggcaaagtggtgcgtgatgcgggcaggctgcac
agcgggcaggtgttgcagctgcattttgaaaccggcacagccaaggcgcaggtgctgccg
cagcgtaccgggcagcaggatttgtttgattag
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