Eikenella corrodens: SAMEA4412678_0967
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Entry
SAMEA4412678_0967 CDS
T05039
Symbol
rfaC
Name
(GenBank) Lipopolysaccharide heptosyltransferase 1
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
ecor
Eikenella corrodens
Pathway
ecor00540
Lipopolysaccharide biosynthesis
ecor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA4412678_0967 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecor01005
]
SAMEA4412678_0967 (rfaC)
Enzymes [BR:
ecor01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
SAMEA4412678_0967 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
ecor01005
]
Core region
SAMEA4412678_0967 (rfaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
SNW08344
UniProt:
A0A8B4G7E6
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All DBs
Position
1:964798..965787
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AA seq
329 aa
AA seq
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MKILLVRLSSMGDLIHTLPAVQDLAQHCPQVELHWLAEAGFADIARLHPFVAKVIPMRWR
QWRKRLFAADTRRQIRALKQELAGGGYDFVLDSQGLIKSAWFARQAGVPVKGLDKHSARE
GWAAAFYAQGFQVAKGRDAVWRNRELFAQVFGYRFDGAADFGMRVPEGAVVQGLSENYRV
ALHATSRESKLWPDKYWVELLNRLHAADGAAVWLPWGSEVERQRALALADQIEAAQVPEE
KLSLLQAAYVLRGARSVIGVDTGLLHLANALDKPLIGIYTDSDPAKTGVQPSAWAENMGG
IGCLPQPEEVFERLLLLEQVYQDSQEIFR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttactggtgcgcctctccagcatgggcgatcttatccacaccctgccggca
gtacaggatttagcgcagcattgcccgcaggtggagttgcattggctggccgaggcaggg
tttgccgatattgcgcgcttgcatccgtttgtggccaaggtgattccgatgcgatggcgg
cagtggcgcaaacggctgtttgcggcggatacgcggcggcagatacgcgcgctgaagcag
gagttggccggtggcggctatgatttcgtgctcgatagccaaggcttgataaaaagcgca
tggtttgcccgccaagcgggtgtgccagtgaagggtttggacaaacacagcgcgcgtgag
ggttgggcggcggcgttttatgcgcaaggttttcaggtagccaaagggcgtgatgcggtg
tggcgcaaccgcgagctgtttgcccaagtgttcggttatcggtttgacggcgcggcggat
ttcggcatgcgtgtgccggaaggcgcggtggtgcaggggctatctgaaaactaccgtgtg
gctttgcacgccaccagccgtgagagcaaattgtggccggacaaatattgggtggaattg
ctgaatcggctgcatgcagcagacggtgcggcggtgtggctgccgtggggcagcgaggta
gaacggcagcgcgcattggccttggcggatcagatagaggcggcgcaggtgccggaagaa
aagctcagcctgctgcaggcggcctatgtattgcgcggcgcgcgcagcgttatcggtgtg
gatactgggctgctgcatttggccaatgcgttggataagccgctgatcggtatttatacc
gacagcgatccggcaaaaaccggcgtgcagccctcggcttgggcggagaatatgggcggt
atcggctgcctgccgcagccagaggaagtgtttgaacgtttgctcctgcttgagcaggtt
tatcaagatagccaggagattttcaggtag
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