Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_2408
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Entry
EC958_2408 CDS
T04373
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EC958_2408 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecos03400
]
EC958_2408 (alkA)
Enzymes [BR:
ecos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EC958_2408 (alkA)
DNA repair and recombination proteins [BR:
ecos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EC958_2408 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CDN82745
UniProt:
A0AA36P780
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All DBs
Position
complement(2346137..2346985)
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AA seq
282 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEYRGVVTAIPDIARHTLH
INLSVGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAGRPGLRLPGCVDAFEQGVRA
ILGQLVSVAMAAKLTSRVAQLYGERLDDFPDYVCFPTPQRLAVADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcggcgtggaaacggtcgcggacagttattatgcccgtagtctggcg
gtaggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgtaggtttagaacctgttgccgctgagtgtctggcgaaaatgagccgc
ctgtttgatctgcaatgtaacccgcagattgttaacggtgcgttgggaaagttaggcgcg
gggcggcccggattgcgtttacctggttgtgttgacgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgacctccagagtggcacag
ctttatggcgaacggctggatgattttccggattatgtctgcttccccacgcctcagcgg
ctggcagtagccgacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gacgtagaacaagcgatgaaaacgctgcaaacctttccgggtatcgggcgctggacggca
aattattttgctttgcgtggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcacaaatccgccgttatgccgaacgctgg
aagccctggcgttcttatgcgttgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
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