Escherichia coli O8 IAI1 (commensal): ECIAI1_4397
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Entry
ECIAI1_4397 CDS
T00828
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecr03019
]
ECIAI1_4397 (orn)
03009 Ribosome biogenesis [BR:
ecr03009
]
ECIAI1_4397 (orn)
Messenger RNA biogenesis [BR:
ecr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECIAI1_4397 (orn)
Ribosome biogenesis [BR:
ecr03009
]
Eukaryotic type
Pre-60S particles
RNases
ECIAI1_4397 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAR01140
LinkDB
All DBs
Position
4475687..4476232
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatccc
gagcgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctg
gcagaagggccgaccattgcagtacaccagtctgatgaacagctggcgctgatggatgac
tggaacgtgcgcacccataccgccagcgggctggtagagcgcgtgaaagcgagcacgatg
ggcgatcgggaagctgaactggcaacgctcgaatttttaaaacagtgggtgcctgcggga
aaatcgccgatttgcggtaacagcatcggtcaggaccgtcgtttcctgtttaaatacatg
ccggagctggaagcctacttccactaccgttatctcgatgtcagcaccctgaaagagctg
gcgcgccgctggaagccggaaattctggatggttttaccaagcaggggacgcatcaggcg
atggatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaag
ctgtaa
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