Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_2207
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Entry
ECIAI39_2207 CDS
T00829
Symbol
ycbS
Name
(GenBank) putative outer membrane export usher protein
KO
K07347
outer membrane usher protein
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Pathway
ect02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECIAI39_2207 (ycbS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ect02000
]
ECIAI39_2207 (ycbS)
02044 Secretion system [BR:
ect02044
]
ECIAI39_2207 (ycbS)
02035 Bacterial motility proteins [BR:
ect02035
]
ECIAI39_2207 (ycbS)
Transporters [BR:
ect02000
]
Other transporters
Pores ion channels [TC:
1
]
ECIAI39_2207 (ycbS)
Secretion system [BR:
ect02044
]
Chaperone-usher system
Type 1 pilus assembly protein
ECIAI39_2207 (ycbS)
Bacterial motility proteins [BR:
ect02035
]
Pilus system
Fimbrial proteins
ECIAI39_2207 (ycbS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
CAR18334
UniProt:
A0A0H3MID4
LinkDB
All DBs
Position
complement(2252558..2255158)
Genome browser
AA seq
866 aa
AA seq
DB search
MYRTQRQHSLLSSGGVPSFIGGLVVFVSAVFNAQAETWFDPAFFKDDPSMVADLSRFEKG
QKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQL
DKQACAPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINALLLGYS
FSGANSIHSSAGSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRA
VIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQVTI
KQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGR
IKYAVTLAKYRTNSNDQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRTAMFGLGFNLGD
FGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTM
YKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHT
DQQDRLLQFGYNTQIKDLSLGVSWNYSKSRGQPDADQVFALNFSLPLNLLLPKSNDSYTR
KKNYAWMTSNTSIDNEGHSTQNLGLTETLLDDGNLSYSIQQGYNSEGKTANGSASMDYKG
AFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVAN
STGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAH
AGARVLMKTSKQGMPLRFGAMATLDGAQTISGIIDDDGSLYMSGLPAKGTITVRWGDAPD
QICHISYELTEQQINAAITRMDSVCE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaactcaacgacaacacagcctgttaagctctggtggagtgccatcgtttatt
ggtgggctggtggtgtttgtgtcggcagtgttcaatgcacaagctgaaacctggttcgat
ccagcctttttcaaagatgatccctcaatggtggctgatttgtctcgtttcgaaaaaggg
caaaaaataacgccaggggtttatcgagtcgatattgttctgaatcagacaattgtagat
acgcgcaacgtcaattttgttgagataacgccagagaaggggattgccgcctgtttgacg
actgaaagcctggatgcaatgggcgtgaatactgatgcgtttccggcttttaaacaactg
gataaacaagcgtgtgcgccattggcggaaattattccggatgccagcgtaacttttaat
gtgaataaactccgtctggaaatttcagtaccgcaaatcgccatcaaaagtaacgctcgt
ggttatgtcccccctgaacgttgggatgaagggatcaacgcgctattactgggatattca
tttagcggggctaacagtattcatagcagcgcaggtagtgattctggcgacagctatttt
ctgaatttaaacagtggcgttaatttaggcccatggagattgcgcaacaattcaacatgg
agtcgcagtagtggccaaaccgcagaatggaagaatctcagcagctatttgcagcgggcg
gtgattccattaaaaggcgaactgaccgtcggtgatgattatacggcaggcgattttttt
gatagcgtcagctttcgtggcgtgcagctggcgtcagatgacaacatgctgccagacagc
ttgaaagggtttgcgccagtggtgcgtggtatcgccaaaagcaatgcacaggtaacgatt
aagcaaaatggttacaccatctatcaaacttatgtttcgcctggcgcttttgagattagt
gatctctactctacgtcgtcgagtggtgatttgttggttgaaatcaaagaagctgacggt
agtgtcaatagttacagtgtgcccttttccagcgtgccattactccagcgtcagggacgc
atcaaatatgcggtgacgctggcgaaatacagaaccaatagtaatgaccagcaagaaagt
aaatttgctcaggccacgctgcaatggggtgggccgtggggaacgacctggtatggcgga
gggcaatatgctgaatattaccgtaccgctatgtttggtctgggttttaacctcggcgat
ttcggagcaatttcgttcgacgcgacccaggctaaaagtacgctggcagaccaaagtgaa
cataaagggcagtcatatcgttttctgtatgccaaaacgctcaaccaattgggcaccaac
tttcaattgatgggctaccgctattcgacgtcgggtttctacaccctttccgacactatg
tataaacacatggatggctatgaatttaatgacggtgatgatgaagatacgccaatgtgg
tcgcgttattacaatttgttttacaccaaacgtggcaaactgcaggtcaacatctcccag
caattaggcgagtacggttcgttttatttaagcggtagccagcaaacttactggcatacc
gatcaacaggatcggctattacagtttggctacaacacgcaaattaaagatctctcgctg
ggggtttcctggaactacagtaagtcccgtggtcaacctgacgctgaccaggtgtttgca
cttaatttttccctgccgctcaatctgttgctccccaaaagtaatgatagctataccagg
aaaaaaaattacgcctggatgacctctaataccagtatcgataatgaagggcattccaca
cagaacctcgggttaaccgagacattgctggatgacggcaacctgagctacagcatacaa
caggggtataacagcgaggggaaaacggctaatggtagcgccagtatggactacaaaggg
gcgtttgcagatgctcgagtgggctacaactacagcgataacggcagtcaacaacaactt
aactacgctctttcaggcagtttagttgcccattcacaaggcattaccctggggcaatcg
ctgggagaaactaacgttctgattgccgcgccaggcgcagagaatactcgtgtggcgaac
agcaccgggctgaaaactgactggcgtggatataccgttgtgccttatgccacttcttat
cgggaaaatcgaattgcacttgatgcggcgtcgttaaaacgtaacgtggatcttgaaaat
gccgtagtaaacgtggttcccaccaaaggggcattggttctggcggagttcaatgcccat
gcgggggccagggtattaatgaaaacatcaaagcagggtatgccgctgagatttggtgca
atggcaacactggatggcgcacaaacaattagcggtatcattgatgatgatggttcgctc
tatatgtctggtttgccggcgaagggaacgataactgtacgctggggcgacgctcccgat
caaatttgtcatatcagttacgagcttaccgaacaacaaattaacgctgcgattacgcgg
atggattcagtatgcgaataa
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