Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_3776
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Entry
ECIAI39_3776 CDS
T00829
Symbol
yrdC
Name
(GenBank) putative ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ect
Escherichia coli O7:K1 IAI39 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ect00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ect03009
]
ECIAI39_3776 (yrdC)
03016 Transfer RNA biogenesis [BR:
ect03016
]
ECIAI39_3776 (yrdC)
Enzymes [BR:
ect01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
ECIAI39_3776 (yrdC)
Ribosome biogenesis [BR:
ect03009
]
Prokaryotic type
Other maturation factors
ECIAI39_3776 (yrdC)
Transfer RNA biogenesis [BR:
ect03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECIAI39_3776 (yrdC)
Prokaryotic type
ECIAI39_3776 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
CAR19890
UniProt:
A0A0H3MV46
LinkDB
All DBs
Position
complement(3945218..3945790)
Genome browser
AA seq
190 aa
AA seq
DB search
MNNNLQGDSIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL
IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD
HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD
ALTGELFRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataacctgcaaggagactctatcgcagctgcgatagatgtcctcaatgaagaa
cgtgtcatcgcctatccaacggaagccgttttcggtgtcgggtgcgatcctgatagcgaa
acagcagtgatgcgactgttggagttaaaacagcgtccggttgataaggggctgattcta
atcgccgcaaattacgagcagcttaaaccctatattgatgacaccatgctgactgacgcg
cagcgtgaaactatattttctcgctggccaggtcctgtcacctttgtttttcccgcgcct
gcgacaacaccgcgctggttgacgggccgctttgattcgcttgctgtacgagtcaccgac
catccgttggtggttgctttgtgccaggcttatggtaaaccgctggtttctaccagtgcc
aacttgagtggattgccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgcg
gcgttcccggttgtgcctggtgaaacgggggggcgtttaaatccttcagaaatccgcgat
gccctgacgggtgaactgtttcgacaggggtaa
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