Encephalitozoon cuniculi: ECU01_1120
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Entry
ECU01_1120 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ecu
Encephalitozoon cuniculi
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecu03016
]
ECU01_1120
Enzymes [BR:
ecu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ECU01_1120
Transfer RNA biogenesis [BR:
ecu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ECU01_1120
Prokaryotic type
tRNA splicing ligases
ECU01_1120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
860291
NCBI-ProteinID:
NP_001402200
LinkDB
All DBs
Position
I:130833..132266
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AA seq
477 aa
AA seq
DB search
MGGIEQSSLYIKVSPSFNKSMRTSATIYVDEELRKPLMSELEAGKGLSSIGQISDVCSLP
GLIGDVIGLPDIHTGYGFPIGSVAAFDINNPESVVSPGGVGYDINCGVRALRTNLDIGGF
RGKADALADELFNIIPTGMGSDRRSRIGLDVLNSVLEQGLGYLLKSKEISDEDVEYCESN
GCMAGDSRFVGQKSKGKGLNQLGTLGSGNHYLEVQYVDEVYDAEKAGIMGIGKGQIVVMI
HTGSRGLGHGVCHSSLMKMAGKALDCSQLACSPYNSKESQEYLLSMGCAANFAFVNRAMV
TEKARQAFGKVFPGSRLELVYDVCHNIVKIEKHRVHGVEYDAIVHRKGASRAFPPHHPDI
PWKYREIGQPVVVGGSMGTYSYILCGSEKSMDLSFGSTCHGAGRVLSRSMSKTLFTHESV
CDLLRSRDIVFRCPSDLGVVEEAPGCYKDVNRVVDLSDRVGLTEKVCRLKPCLVIKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtatagagcaaagcagtctttacattaaagtcagtccgtcctttaacaaatcc
atgaggacatcggcaaccatatatgttgacgaggagctaagaaagcctctaatgtctgag
ctagaggctgggaagggcttatcctccatcggtcagatatccgatgtctgctccttgccg
gggctcattggcgatgtcataggactgccagacatacacacggggtatggattccccatc
ggatccgttgctgcatttgacataaacaacccagagtcggttgtaagccctggaggtgtg
ggatacgacatcaactgcggggttcgggcgctaagaaccaatctcgacatcggcgggttc
aggggaaaggcagatgcccttgccgacgagctgttcaacataatacccactggaatgggt
agtgacaggagatcaaggattgggctagacgtgctgaactcggttctagagcaaggactg
ggctatctgctgaaatcaaaggaaatatctgacgaggacgtcgagtattgcgagagcaat
ggatgcatggctggagacagccgctttgtcggtcagaagtcgaagggcaagggattgaat
cagcttggaacccttgggtctggaaaccactatctcgaggtgcagtatgtcgacgaggtg
tatgatgcagaaaaggcaggcataatggggatagggaaggggcagattgtcgtgatgata
cacactggaagccgaggccttgggcacggagtgtgccatagctcgctgatgaagatggca
ggaaaggctttggattgtagtcaacttgcatgctccccctataactcgaaagagtctcaa
gaataccttctctctatgggatgtgcagcaaactttgccttcgtcaacagagcgatggta
accgaaaaggccaggcaggcatttggaaaggtatttccggggtcaaggcttgagctggtc
tacgatgtttgccataacattgtaaagatagagaagcacagggttcatggggtggagtat
gacgcgattgtgcacaggaaaggggcatccagagcatttcctccgcaccatccagacatt
ccgtggaagtacagggagataggacagcctgtagtggtgggagggtcgatgggaacgtac
agttatattctgtgtggatcagaaaagtccatggacctgagctttgggtcgacatgccat
ggggcaggacgtgtcctttccagaagcatgtcaaagaccctgtttacccatgagagcgtc
tgcgatcttctaaggagcagggacatagtattcaggtgtccaagtgaccttggggtcgtt
gaagaagcgcctgggtgctacaaggacgtcaatagagttgttgacctaagcgacagggtc
gggctgacagaaaaggtttgccgtctcaagccatgcctggtcattaaaggctag
DBGET
integrated database retrieval system
