Escherichia coli APEC O1 (APEC): APECO1_1159
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Entry
APECO1_1159 CDS
T00425
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APECO1_1159 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecv03400
]
APECO1_1159 (alkA)
Enzymes [BR:
ecv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
APECO1_1159 (alkA)
DNA repair and recombination proteins [BR:
ecv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APECO1_1159 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABJ01464
UniProt:
A0A0H2Z0E5
LinkDB
All DBs
Position
complement(2234320..2235168)
Genome browser
AA seq
282 aa
AA seq
DB search
MYTLNWQPPYDWSWMLGFLAARAVSSVETGADSYYACSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSCLFDLQCNPQIVNGALGKLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPDYVCFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKKLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcagcgtggaaacgggcgcggacagttattatgcctgtagtctggcg
gtaggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacctgttgccgctgagtgtctggcgaaaatgagctgc
ctgtttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggcagtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggattatgtctgcttccccacgcctcagcgg
ctggctgcagccgacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcactgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gacgtagaacaagcgatgaaaaaactgcaaacttttccggggatcgggcgctggacggcg
aattatttcgccttgcgcggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcacaaatccgccgttatgccgagcgctgg
aaaccttggcgttcttatgcgttgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
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