Escherichia coli APEC O1 (APEC): APECO1_818
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Entry
APECO1_818 CDS
T00425
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APECO1_818 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecv03400
]
APECO1_818 (xthA)
Enzymes [BR:
ecv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
APECO1_818 (xthA)
DNA repair and recombination proteins [BR:
ecv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
APECO1_818 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABJ01120
UniProt:
A0A0H2YZZ4
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All DBs
Position
1847104..1847922
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AA seq
272 aa
AA seq
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MAATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFY
HGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESR
DHPIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGK
CSFLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQP
LAECCVETGIDYEIRSMEKPSDHAPVWATFRR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgactatgaaatttgtctcttttaatatcaacggcctgcgcgccagacctcac
cagcttgaagccatcgtcgaaaagcaccaaccggatgtgattggcctgcaggagacaaaa
gttcatgacgatatgtttccgctcgaagaggtggcgaagctcggctacaacgtgttttat
cacgggcagaaaggccattatggcgtggcgctgctgaccaaagagacgccgattgccgtg
cgtcgcggctttcctggtgacgacgaagaagcgcaacggcggattattatggcggaaatc
ccctcgccgctgggcaatgtcaccgtgatcaacggttacttcccgcagggtgaaagccgc
gaccatccgataaaattcccggcaaaggcgcagttttatcagaatctgcaaaactacctg
gaaaccgaactcaagcgtgaaaatccggtgctgattatgggcgatatgaatatcagtcct
ggcgacctggatattggcattggcgaagagaaccgtaagcgctggctgcgtaccggaaaa
tgttctttccttccggaggaacgcgaatggatggagaggctgatgagctgggggttggtc
gataccttccgccatgcgaatccgcaaacagcagatcgtttctcatggtttgattaccgc
tcaaaaggttttgacgataatcgcggtctgcgcatcgacctgctgctcgccagccaaccg
ctggcagaatgttgcgtagaaaccggcatcgactatgaaattcgcagcatggaaaaaccg
tccgatcacgcccccgtctgggcgaccttccgccgctaa
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