Escherichia coli O9 HS (commensal): EcHS_A4324
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Entry
EcHS_A4324 CDS
T00591
Symbol
fdhF
Name
(GenBank) formate dehydrogenase H, alpha subunit, selenocysteine-containing
KO
K22015
formate dehydrogenase (hydrogenase) [EC:
1.17.98.4
1.17.98.-]
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx00680
Methane metabolism
ecx01100
Metabolic pathways
ecx01120
Microbial metabolism in diverse environments
ecx01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
EcHS_A4324 (fdhF)
Enzymes [BR:
ecx01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
EcHS_A4324 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
ABV08484
UniProt:
A0A7I6H8Q9
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All DBs
Position
complement(4328421..4330568)
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AA seq
715 aa
AA seq
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MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP
RLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVM
QKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNAINEIDNTDLVFVFGYNPADS
HPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALKNGSNIALLNAMGHVIIEENLY
DKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSASEIRQAARMYAQAKSAAILWGMGVT
QFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDP
ANREKFAKAWGVESLPAHTGYRISELPHRAAHGEVRAAYIMGEDPLQTDAELSAVRKAFE
DLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFTAADRGFQRFFKAVEPKWDLKTDWQ
IISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGATYEKMGELGFIQWPCRDTSDADQGT
SYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAA
LADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGA
CNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQYVIDEYNKLKTRLREAALA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcgtcacggtttgcccctattgcgcatcaggttgcaaaatcaacctggtc
gtcgataacggcaaaatcgtccgggcggaggcagcgcaggggaaaaccaaccagggtacc
ctgtgtctgaagggttattatggctgggatttcattaacgatacccagatcctgaccccg
cgcctgaaaacccccatgatccgtcgccagcgtggcggcaaactcgaacctgtttcctgg
gatgaggcactgaattacgttgccgagcgcctgagcgccatcaaagagaagtacggtccg
gatgccatccagacgaccggctcctcgcgtggtacgggtaacgaaaccaactatgtaatg
caaaaatttgcgcgcgccgttattggtaccaataacgttgactgctgcgctcgtgtctga
cacggcccatcggttgcaggtctgcaccaatcggtcggtaatggcgcaatgagcaatgct
attaacgaaattgataataccgatttagtgttcgttttcgggtacaacccggcggattcc
cacccaatcgtggcgaatcacgtaattaacgctaaacgtaacggggcgaaaattatcgtc
tgcgatccgcgcaaaattgaaaccgcgcgcattgctgacatgcacattgcactgaaaaac
ggctcgaacatcgcgctgttgaatgcgatgggccatgtcattattgaagaaaatctgtac
gacaaagcgttcgtcgcttcccgtacagaaggctttgaagagtatcgtaaaatcgttgaa
ggctacacgccggagtcggttgaagatatcaccggcgtcagcgccagtgagattcgtcag
gcggcacggatgtatgcccaggcgaaaagcgccgccatcctgtggggcatgggtgtaacc
cagttctaccagggcgtggaaaccgtgcgttctctgaccagcctcgcgatgctgaccggt
aacctcggtaagccgcatgcgggtgtaaacccggttcgtggtcagaacaacgtgcagggt
gcctgcgatatgggcgcgctgccggatacgtatccgggataccagtacgtgaaagatccg
gctaaccgcgagaaattcgccaaagcctggggcgtggaaagcctgcctgctcataccggt
tatcgcatcagcgagctgccgcaccgcgcagcgcatggcgaagtgcgtgccgcgtacatt
atgggcgaagatccgctgcaaactgacgcggagctgtcggcagtacgtaaagcctttgaa
gatctggaactggttatcgttcaggacatctttatgaccaaaaccgcgtcggcggcggat
gtcattttgccgtcaacgtcgtggggcgagcatgaaggcgtgtttactgcggctgaccgt
ggcttccagcgtttcttcaaagcagttgaaccgaaatgggatctgaaaacggactggcaa
atcatcagtgaaatcgccacccgtatgggttatccgatgcactacaacaacacccaggag
atctgggatgagttgcgtcatctgtgcccggatttctacggtgcgacttacgagaaaatg
ggcgaactgggcttcattcagtggccttgccgcgatacttcagatgccgatcaggggact
tcttatctgtttaaagagaagtttgataccccgaacggtctggcacagttcttcacctgc
gactgggtagcgccaatcgacaaactcaccgacgagtacccgatggtactgtcaacggtg
cgtgaagttggtcactactcttgccgttcgatgaccggtaactgtgcggcactggcggcg
ctggctgatgaacctggctacgcacaaatcaataccgaagacgccaaacgtctgggtatt
gaagatgaggcattggtttgggtgcactcgcgtaaaggcaaaattatcacccgtgcgcag
gtcagcgatcgtccgaacaaaggggcgatttacatgacctaccagtggtggattggtgcc
tgtaacgagctggttaccgaaaacttaagcccgattacgaaaacgccggaatacaaatac
tgcgccgtgcgcgtcgagccgatcgccgatcagcgcgccgccgagcagtacgtgattgac
gagtacaacaagttgaaaactcgcctgcgcgaagcggcactggcgtaa
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