Escherichia coli O152 H28 SE11 (commensal): ECSE_3542
Help
Entry
ECSE_3542 CDS
T00784
Name
(GenBank) DNA-binding protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecy03000
]
ECSE_3542
03036 Chromosome and associated proteins [BR:
ecy03036
]
ECSE_3542
03400 DNA repair and recombination proteins [BR:
ecy03400
]
ECSE_3542
Transcription factors [BR:
ecy03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECSE_3542
Chromosome and associated proteins [BR:
ecy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ECSE_3542
DNA repair and recombination proteins [BR:
ecy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ECSE_3542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Phage_NinH
Inhibitor_I24
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAG79066
UniProt:
B6I1Y1
LinkDB
All DBs
Position
3674331..3674627
Genome browser
AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtaaattctgacgtactgaccgtttctaccgttaactctcaggat
caggtaacccaaaaacccctgcgtgactcggttaaacaggcactgaagaactattttgct
caactgaatggtcaggatgtgaatgacctctatgagctggtactggctgaagtagaacag
cccctgttggacatggtgatgcaatacacccgtggtaaccagacccgtgctgcgctgatg
atgggcatcaaccgtggtacgctgcgtaaaaaattgaaaaaatacggcatgaactaa
DBGET
integrated database retrieval system
