Escherichia coli DH1: ECDH1ME8569_1760
Help
Entry
ECDH1ME8569_1760 CDS
T02102
Symbol
yoaD
Name
(GenBank) YoaD protein
KO
K21090
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
edj
Escherichia coli DH1
Pathway
edj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECDH1ME8569_1760 (yoaD)
Enzymes [BR:
edj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ECDH1ME8569_1760 (yoaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
MSC
Motif
Other DBs
NCBI-ProteinID:
BAJ43616
LinkDB
All DBs
Position
1881808..1883406
Genome browser
AA seq
532 aa
AA seq
DB search
MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV
LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV
VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ
LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY
LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV
EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA
PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG
TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE
QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagcacaacggatcattaaaacctatcgtcgtaatcgaatgattgtttgtacg
atttgcgcactcgttacgctcgcttcgaccctgagcgtgcgatttatttcacagcgtaac
ttaaatcaacaacgggtagtacaattcgccaatcacgctgtagaggaattagataaagta
ctgcttcccctacaggcaggtagcgaagtcttgcttccgctgattggtctgccctgctct
gtcgcccatttgccattacgtaaacaggcggcaaaactccaaactgtgcgatccattggc
ctggtgcaagacggcacactttattgctccagcatttttggttatcgcaatgtgcccgtc
gtggacattctggctgaacttcctgcaccgcaaccacttttacgcctgacgatcgaccgt
gccctgattaaaggcagtccggttttgattcaatggacgcctgcagcgggcagtagcaat
gctggggtcatggagatgattaacatcgacttactgacggcaatgctgcttgagccacaa
ctgccgcaaatcagtagcgccagcctgacggtggacaaacggcatttgctctatggtaat
gggctggtagattcccttccgcaacctgaagacaatgaaaactatcaggtttcttcgcaa
cgctttccttttaccattaacgttaatggtccgggggctacggcgctggcatggcactat
cttccaacacaattaccgctggcggtgctgctaagtttactggtgggctacatcgcctgg
ctggcgaccgcttaccgaatgagcttttcccgcgaaatcaatctgggcctggcgcaacat
gagttcgaattgttctgtcagcctttgcttaatgcgcgcagccagcaatgtattggtgta
gagattttgctgcgctggaacaatccgcgtcagggctggatttcaccggatgtgtttatt
cctatcgcggaagaacatcatttaattgtgccactgacccgctatgtgatggcagaaacc
attcgtcagcgccatgttttcccgatgagtagtcagtttcatgttggcattaacgtcgca
cccagccattttcgccgtggtgtgctgataaaagatctcaatcagtactggtttagcgct
cacccgattcagcaactgatcctcgaaatcaccgaacgcgatgccttactggatgttgat
tatcggattgcccgcgagctgcatcgtaaaaacgtcaaactggcgattgatgacttcggc
accggcaacagctcgttttcctggcttgaaacattacgtcctgacgtgctgaaaattgat
aagtcatttaccgcagctataggttctgacgcggttaactcgacggtgaccgatatcatc
atcgcgctggggcaaagactgaatattgaactggtggcggagggcgtggaaacgcaagaa
caggcgaagtatttgcgccgtcatggcgtgcatattttgcaagggtatttgtacgcacag
ccgatgccgctacgtgattttcccaaatggctggcgggcagccaaccgccgcccgcccgg
cataatggacatatcacgcccattatgccgttacgttaa
DBGET
integrated database retrieval system
