Escherichia coli DH1: ECDH1ME8569_1895
Help
Entry
ECDH1ME8569_1895 CDS
T02102
Symbol
yedQ
Name
(GenBank) putative diguanylate cyclase
KO
K21085
diguanylate cyclase [EC:
2.7.7.65
]
Organism
edj
Escherichia coli DH1
Pathway
edj02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECDH1ME8569_1895 (yedQ)
Enzymes [BR:
edj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
ECDH1ME8569_1895 (yedQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE7
GGDEF
dCache_1
RRM_2
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
BAJ43751
LinkDB
All DBs
Position
complement(2010126..2011802)
Genome browser
AA seq
558 aa
AA seq
DB search
MENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANA
LDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPV
NGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVST
QPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS
NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRE
LALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLW
ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH
QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP
GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR
LYLAKQAGRNRVFASDNA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccagagctggttgaaaaaactcgcacgccgcctggggcctggtcatgtcgtt
aatctctgctttatcgtggtattgcttttttccaccttgctcacctggcgtgaagtggtg
gtgctggaagatgcctatatctccagccagcgtaatcatctggaaaacgttgccaacgcg
ctcgataagcatttgcagtataacgtcgacaaactgatctttttacgtaatggcatgcgc
gaagctctcgtagcgccactggatttcacctctctgcgtgatgctgtaaccgagttcgaa
cagcatcgcgacgagcacgcctggaaaatcgaactcaaccgacgacgcactctgccagtt
aatggtgtgtcggatgcattagtcagcgaggggaatctcctgtctcgcgaaaatgaaagc
ctcgacaatgaaattaccgctgcactggaagttggttacttgctgcgactagcgcacaac
tcctcgtcgatggttgaacaggcgatgtatgtctcgcgtgccggattttacgtttcgacg
cagccgaccttgtttacgcgcaatgttccaacgcgttattacggctatgtcacccaaccc
tggtttattggccattcacaacgagaaaatcgtcaccgcgcggtacgctggttcacttcg
caaccggaacacgccagcaatactgaaccgcaggttaccgtcagtgttccggtagacagt
aataactactggtatggcgtgctggggatgagtattcccgtgcgtactatgcagcaattt
ttaagaaacgccatcgataaaaacctcgatggtgagtatcagctctatgacagtaagctg
agatttttgacctcttccaatcctgaccatccaacagggaatatttttgatcctcgtgaa
ctggccttgctggcgcaggcaatggaacatgacacgcggggcggcattcgtatggacagt
cgctatgttagctgggaacgtctggaccatttcgacggtgtgctggtgcgtgtccatacg
ttaagcgaaggcgtgcgcggcgatttcggcagtatcagcattgcattaaccctgctgtgg
gcgctctttaccaccatgttactcatctcctggtatgtgattcgccggatggttagcaac
atgtatgttctgcaaagctcgttgcagtggcaggcgtggcacgacaccttaacgcgttta
tataaccgtggcgcactgttcgaaaaagcccgtccgctcgctaaattgtgtcagacgcac
caacatcctttttctgtcattcaggtcgatcttgaccattttaaagcgattaatgaccgc
tttggtcatcaggcgggcgaccgtgttctttctcatgctgccggattaattagcagttcc
ttgcgtgcgcaggacgttgccgggcgggtcggtggtgaggagttttgtgtgattctgcca
ggcgcgagtctgacggaggctgcggaggtcgcagaacgtattcgactgaaattaaatgaa
aaagagatgttgatcgccaagagtacgacgatacgcatcagtgcctcgctgggggtaagc
agcagcgaggaaaccggtgattatgattttgaacaactccagtcactggccgaccgtcgg
ctttatctcgctaaacaggctgggcgtaatcgggtattcgcgagcgataacgcttaa
DBGET
integrated database retrieval system
