Edwardsiella sp. LADL05-105: AAZ33_14000
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Entry
AAZ33_14000 CDS
T04005
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl00550
Peptidoglycan biosynthesis
edl01100
Metabolic pathways
edl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AAZ33_14000 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AAZ33_14000 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
edl01011
]
AAZ33_14000 (mrdA)
Enzymes [BR:
edl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AAZ33_14000 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
edl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AAZ33_14000 (mrdA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AKR78560
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Position
3127295..3129190
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AA seq
631 aa
AA seq
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MKLDRNPFRDYSAESALFIRRALFAFVGVLLLTGVLLANLYHLQILRFEDYRTRSNENRI
KLVPIAPSRGMIYDRNGTPLAFNRTIYQLEVIPEKVDGMTAQLDALRPIVDLTDEDLDSF
QKERKRSRRFTSIPLKTALSEVQVARFAVNQFRFPGFEVKGYQRRYYPYGSALTHVIGYV
SKINDKDVERLDKEGKLANYAATHDIGKLGIERYYEDVLHGKTGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTLDLNLQRYIEQLLVGSRAAVVVSDPRSGGILALVSTPSYDPNLFVD
GISGKDYRGLLNDPNRPLINRATQGVYPPASTVKPYVAVSALSAGVISRNTTLFDPGWWQ
LPGSEKRFRDWKKWGHGRLSVTKALEESADTFFYQVAYDMGIDRLSEWLSKFGYGQYTGI
DLSEERSGLMPTREWKLKRYKKPWYQGDTIPVGIGQGYWTATPIQMAKALNTLINDGNVK
VPHLLMSTRINGQLVPFRQQESQQIGDIHSGFWEIAKDGMFGVANRPNGTGYKYFGSAPY
KIAAKSGTAQVFGYETYNAHTIAEHLRDHKLMTAFAPYDNPQVSVAIILENGGAGPAVGT
IMRQILDHIMLGDNNTQLPNAAPTPPGVEGD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagatcgtaacccctttcgtgactattcggcagagtccgccctgttcatccgt
cgtgcgctgttcgccttcgtcggcgtactgctgctgaccggcgtactgctcgccaatctg
taccacctgcaaattctgcgttttgaagactacaggacgcgctctaacgaaaaccgcatc
aagctggtgcccatcgcccccagccgcggcatgatctacgatcgcaacggcaccccgctg
gcgtttaaccgcaccatctaccagttggaggtgatccccgaaaaggtcgacggaatgaca
gcgcagctcgatgcgctacgcccgatcgtcgatctgaccgacgaggatctcgacagcttc
cagaaggagcgcaagcgctcgcggcgcttcacctcgattccgctgaagaccgccctcagc
gaggtgcaggtggcccgctttgccgtcaaccagttccgcttccccggctttgaggtcaag
ggctaccagcgtcgctactacccctacggctccgccctgacccacgtcatcggctatgtc
tccaagatcaacgacaaagacgtcgagcgtctggataaagaggggaagctggccaactac
gccgccacccacgacatcggcaagctgggcatcgaacgttactatgaggatgtgctgcac
ggcaaaaccggctatgaagaggtggaggtcaacaaccgcgggcgggtgatccgccagctg
cacgagcagccgccccaggcgggtaaagatatctacctgacgctggatctcaacctgcag
cgctatatcgagcagctgctggtcggcagccgcgccgccgtggtggtcagcgatccgcgc
agcggcgggatcctggcgctggtctccacccccagctacgaccctaacctgttcgtcgac
ggcatctccggcaaggattaccgcggcctgctcaacgaccccaaccggccgctgatcaac
cgcgccacccagggggtctatcctcccgcttcgacggtcaaaccctacgtcgcggtctcg
gcgctcagcgccggcgtgatctcccgcaataccaccctcttcgaccccggctggtggcag
ctgcccggatcagagaagcgctttcgcgactggaagaagtggggccatgggcggctgagc
gtcaccaaggcgttggaggagtcggcagacaccttcttctaccaggtggcctatgacatg
gggatcgaccgcctgagcgagtggctgtccaagttcggctatggccagtataccggtatc
gatctgtccgaggagcgctccggcctgatgccgacccgcgaatggaagctcaagcgctac
aagaaaccctggtatcagggtgacactatcccggtcggcatcggccagggctactggacc
gcgacgccgatccagatggccaaggcgctcaacaccctgatcaacgacggcaacgtcaag
gtgccacacctgctgatgagcacccgcatcaacggtcagctggtgccgttccgccagcag
gagagccagcagataggcgatattcactccggcttctgggagatcgccaaagatggcatg
ttcggcgtggccaaccggcccaacggcaccggctacaagtattttggcagcgccccgtat
aaaatcgccgccaagtccggtaccgcccaggtcttcggctacgagacctacaacgcgcat
accatcgccgagcatctgcgcgaccataagctgatgaccgccttcgccccctatgacaac
ccgcaggtgtcggtggccatcattctggagaacggcggcgccggcccggcggtgggcacc
atcatgcgccagatcctggatcacatcatgctgggcgacaacaatacccagcttcccaat
gcagcccccacgccacccggcgtggagggcgactga
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