Edwardsiella sp. LADL05-105: AAZ33_16600
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Entry
AAZ33_16600 CDS
T04005
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
edl
Edwardsiella sp. LADL05-105
Pathway
edl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAZ33_16600 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edl03400
]
AAZ33_16600 (uvrA)
DNA repair and recombination proteins [BR:
edl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAZ33_16600 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AAZ33_16600 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
nSTAND3
AAA_25
NACHT
cobW
Viral_helicase1
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AKR78962
LinkDB
All DBs
Position
3758150..3760981
Genome browser
AA seq
943 aa
AA seq
DB search
MDKIEIRGARTHNLKNINLIIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PQHGTPLAAQTVSQMVDNVLAQPEGKRLMLLAPIIKDRKGEHSKTLENLAAQGYIRARID
GEVCDLSDPPKLELQKKHSIDVVVDRFRVKADMAQRLAESFETTLELSGGSAVVADMDDP
QAEEMLFSANFACPLCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPERVVQNGEL
SLAGGAIRGWDRRNFYYFQMLRSLADHYHFDIEAPFDSLDETVRHVVLYGSGKDEIEFKY
INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCATCGGTRLREEARN
VFIKDTTLPQIADLSIGAALRFFHGLALEGQRAKIAEKVLKEIGERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLDTLMHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGKIVAQGNVEQIMATPASLTGQYLSGQRKIAI
PSERIAADPTRVLKLSGARGNNLKEVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATLGEPAPYRSIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLEMTIEEARSFFDAVPALARKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKL
SRELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVAGTPETVARCEASHTARFLRPILDNA
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatagaaatacgcggtgctcgcacccataatctcaagaatatcaatctgatt
atcccccgcgacaaactggtggtcatcaccggtctgtccggatccggcaaatcctctctg
gcgttcgataccctgtatgccgaagggcagcggcgctacgtcgaatccctttctgcctac
gcccgccagttcctgtcgctgatggaaaagccggacgtcgaccatatcgagggactctct
ccggccatctccatcgagcagaaatccacctcccacaacccgagatccaccgtgggaacc
atcactgaaattcatgactacctgcgcctgctgttcgcccgcgtcggtgagccgcgctgt
ccgcagcacggcacgccgctggcggcgcagaccgtcagccagatggtggacaacgttctg
gcccagccggaggggaaacgtctgatgctgctggccccgatcatcaaggatcgcaagggg
gagcacagcaagacgctggaaaacctggcggcgcagggctacatccgcgcccgaatcgac
ggcgaggtgtgcgatctctccgatccgccgaagctggagctgcagaaaaaacacagcatc
gacgtggtcgtcgatcgcttccgagtgaaggccgacatggcccagcgcctggcggaatcg
tttgaaaccaccctggaactctccggcggcagcgcggtggtcgccgatatggacgatccc
caggcggaagagatgctattttccgccaacttcgcctgcccgctgtgcggttacagcatg
cgggagctggagccacggctgttctccttcaataacccggcgggcgcctgccccacctgc
gacggcctcggggtacagcaatatttcgatccggagcgggtggtacaaaacggcgaactg
tcgctggcgggcggcgccattcgcggctgggatcgccgcaacttctactatttccagatg
ctgcgctcgctggccgaccattatcattttgatattgaggcgcccttcgactccctggat
gaaacggtacgccacgtggtgctgtacggctccggcaaagacgagatcgaattcaagtac
attaacgatcgcggcgataccaccgtacgccgtcaccccttcgagggggtgctgcacaac
atggagcgccgctacaaagagactgagtccagcgcggtgcgcgaggagctggccaaattc
atcagcaaccgtccctgcgccacctgcggcgggacgcgtctgcgtgaagaggcgcgcaac
gtcttcattaaagacaccacgctgccgcagatagccgacctcagcatcggcgctgcgctg
cgcttctttcacggactggcgctagagggacagcgcgccaaaatcgccgagaaggtgctg
aaagagatcggcgagcgcctgcagtttttggtcaacgtcggcctgaactacctgagcctg
tcccgctccgccgagaccctgtccggcggcgaagcgcagcgcattcgtctagccagccag
atcggcgccgggctggtcggggtgatgtacgtgctcgatgaaccctccatcggtctgcat
cagcgcgataacgaacgcctgctcgatacgctgatgcatctgcgcaacctgggcaacaca
gtgatcgtggtcgaacacgacgaggacgccatccgcgccgccgaccacgttatcgatatc
ggcccgggcgccggggtgcacggcggcaagatcgtcgcccagggcaacgtggagcagatc
atggcgacgccggcctccctgaccggccaatatctgagtggacaacgtaagatcgccatc
cccagcgagcggatcgccgccgatccgacgcgggtgctcaagctgagcggcgcacgcggc
aataacctgaaagaggtgaccttgaccctgccggtcgggctgttcacctgcatcaccggc
gtttccggctccggcaagtccaccctgatcaacgatacgctgttccccatcgcccagcgc
cagctaaacggcgctacgctgggcgaaccggccccctaccgcagcatcgaggggctggag
catttcgataaggtgatcgacatcgatcagagccccatcgggcgaaccccgcgctctaat
ccggcgacctacaccggcatctttaccccgatccgcgagctattttccggggtgccggag
tcgcgggcgcgcggctataccccgggacgcttcagctttaacgtgcgcggcgggcgctgt
gaggcctgtcagggcgatggggtcatcaaggtggagatgcacttcctgccggacatctat
gtgccgtgcgaccagtgcaagggcaagcgctacaaccgtgaaacgctggagatcaagtac
aagggcaaaagcatccacgaggtgctggagatgaccattgaggaggcgcgcagctttttt
gacgccgttcctgcgctggcgcgcaagctgcagaccctgatggacgtcggcctgggctat
attcgcctggggcagtcggccaccaccctctccggcggcgaggctcagcgggtcaaactc
tcacgcgagctctccaagcgtggcaccggacaaacactgtatatcctggatgagccgacc
accggtctgcactttgccgacattcagcagctgctggcggtactgcaccagctacgcgat
cagggcaacaccatcgtggttatcgagcacaatctggacgtgatcaaaacggcggactgg
atcgtggatctggggccggaaggcggcagcggcggcggcgagatcttggtcgccggcacg
ccggagaccgtcgcccgctgtgaagcctcccatacggcccgcttcctgcgtccgatcctg
gacaatgcctaa
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