Enterobacter ludwigii EcWSU1: EcWSU1_02493
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Entry
EcWSU1_02493 CDS
T01652
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eec
Enterobacter ludwigii EcWSU1
Brite
KEGG Orthology (KO) [BR:
eec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eec03016
]
EcWSU1_02493 (rnb)
Enzymes [BR:
eec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EcWSU1_02493 (rnb)
Transfer RNA biogenesis [BR:
eec03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EcWSU1_02493 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
ODP
Rho_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AEW73928
UniProt:
G8LDR6
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All DBs
Position
2570053..2571987
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
TAVIHTEKERESAEPEELIEPFLTRFVGKVQRKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMQDEGLTRRDLTALEFVTIDSASTEDMDDALYAEESADGKLHLTVAIADPTAWIVEGSK
LDDMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMTIAADGAIEDDIEF
FAATIESKAKLAYDNVSDWLENTGTWKPESDAIAAQIRLLHRICLNRGEWRKTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKNHDVHVDPEEVLTLQGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESIARPQNDTTLQMAERRRLNRM
AERDVGDWLYARYLQDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVHIAEVRMETRSVIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggcttccttgaagttgatgcg
cagaaaagctacttcattccgccaccgcaaatgaagaaagtgatgcatggcgaccgcatt
acggccgtcattcataccgaaaaggaacgagagtccgccgagccggaagaactgatcgaa
ccgttcctgacccgcttcgtgggcaaggtccagcgaaaagacgatcgtctttctatcgtg
ccggatcatcccctgctgaaagatgccattccttgccgcgccgcccgtggtgttgagcat
gatttcaaagaaggtgactgggccgtagctgaaatgcgccgtcatcctctgaaaggcgat
cgtggcttttatgctgaactgacccagttcatcacctttggcgacgaccatttcgtgcca
tggtgggtgacgcttgcacgccataatcttgagaaagaagcgccagacggcgtagcgact
gaaatgcaggacgaaggcctgacgcgtcgcgacctcactgccctggagtttgtcactatc
gacagcgccagcacagaagatatggatgatgcgctgtatgcggaagagagcgctgatggc
aaattgcatttgaccgtcgccattgccgatcccaccgcctggatcgttgaaggcagcaag
ctggacgatatggcaaaagtccgatcgttcactaactacctaccgggcttcaacatcccc
atgttgccgcgcgaactgtcagatgacctctgctcactgcgtccaaatgaagtgcgtccg
gtccttgcctgccgcatgaccatcgccgccgatggcgcgatcgaagacgatattgaattt
tttgccgcaaccatcgaatcgaaagccaagctggcctacgacaatgtttccgactggctt
gagaataccggcacctggaaaccggaatcagacgcgattgccgcacagatccgcctgctg
caccgcatttgtctgaaccgcggcgagtggcgtaaaacccatgcgctggtctttaaggat
cgtccggactatcgctttgtcctgggtgaaaaaggtgaagtgctgaatatcgtggccgaa
ccgcgtcgcattgcgaaccgcattgttgaagaagcgatgatttctgccaacatttgtgcc
gctcgcgtcctgcgtgacaagctgggctttggtatttacaacgtccacaccggttttgat
ccggccaataccgaagcgctggcggccctgctgaagaaccacgatgtgcacgttgacccg
gaagaagtgctgacgctgcagggcttctgtaagctgcgccgcgagctggatgcacagcca
tccggtttcctcgacagccgcatccgtcgtttccagtcctttgctgaaatcagcaccgag
ccgggtccacactttggcctcggcctggaagcctacgcgacctggacgtcacctattcgt
aagtatggcgacatggtcaaccaccgtctgctgaaggcgatcattaagggtgagtccatt
gcgcgtccgcaaaatgacaccaccctacagatggccgaacgacgtcgcctgaaccgtatg
gcggaacgtgacgtgggagactggctgtacgcacgctacctgcaggataaagcgggtaca
gatactcgcttcgccgcagaaatcattgatatcagccggggcggtatgcgcgttcgcctg
gtggataacggtgccgtcgcctttatccctgccccgttcctgcatgccgtccgtgacgaa
ctggtctgcagccaggaaaatggtaccgtgcaaatcaaaggtgaaacagtttacaaagtc
acagacgtgattgacgtacacatcgctgaagttcgcatggaaacccgcagcgttatcgcg
cgcccggtcgcctga
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