KEGG   Electrophorus electricus (electric eel): 113575860Help
Entry
113575860         CDS       T05787                                 

Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
eee  Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:eee00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:eee01009]
    113575860 (hdac6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eee03019]
    113575860 (hdac6)
   04131 Membrane trafficking [BR:eee04131]
    113575860 (hdac6)
   03036 Chromosome and associated proteins [BR:eee03036]
    113575860 (hdac6)
Enzymes [BR:eee01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     113575860 (hdac6)
Protein phosphatases and associated proteins [BR:eee01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113575860 (hdac6)
Messenger RNA biogenesis [BR:eee03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     113575860 (hdac6)
Membrane trafficking [BR:eee04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    113575860 (hdac6)
Chromosome and associated proteins [BR:eee03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     113575860 (hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 113575860
NCBI-ProteinID: XP_026863429
LinkDB All DBs
Position
Unknown
AA seq 1105 aa AA seqDB search
MDSASDPTPPRPKNCTGFPQKPSHNSKRQSSKQSHKQSLQETRRKGRMDRGKGEDEMTNK
LKNLDLKCKQKATGTGVAYSDAFSRFHCLWDTSHSECPERVVTIVKMMEEEGLLSRCVQV
ETRAASEDELSLVHTKEYIDRMKSTQKMTVEELKSVSEDYDSVYLHPESFTCACLGAGSL
LQLVDKVMTSELLNGFSVCRPPGHHAHADKMNGYCMFNNLAVAARYAQKHHAVQRVLIVD
WDVHHGQGIQYIFQQDPSVLYFSVHRYEGGSFWPHMPESDSSAVGLGAGQGYNINLPWKK
LGMGDGDYVTAFQRLLLPIAYEFQPQLVLVAAGFDSVVGDPKGEMCVSPQCCSVLTHMLM
GLAEGRLVFALEGGYNLQATAAGACASLKALLGDPCPHLPCPGAPSESGLKSISDTVSAL
YPFWTSLQTLEGGPLSEKESLPSPVCVEIKLESSSLGTGLVYDQRMMEHHNMWNSHHPEL
PQRIFRIFSCHENLGLVTRCERIPARLATEDELMLCHGSAHIATIKSTEQMKPRDLHRLC
DEYNSIYISNESYKCALLAAGACFNCARAVLTGQVRNAVAIVRPPGHHAESDTACGFCFF
NTAALTARYAQSITHEALRVLIVDWDVHHGNGTQHIFESDCSVLYISLHRYENATFFPSS
EDANYDKVGQGRGTGYNVNIPWNGAKMGDPEYLAAFHNIVMPVAREFAPELVLVSAGFDA
ARGDPLGGYQVTPECYAHLTHQLLSLAAGRVLIILEGGYNLTSISESMAMCTSMLLGDTP
PLLPPLPPPHPNATLTINNVLRVHAPYWRSLRIQIPESLRLSLPSLKPKGKRPSAGKKSP
PHITPDQRRQQSIPVMTSPASPATAQEDSGLDELTQGLCLLDLSTSSSANSSPASVPVGG
ARPKVKPSPQRDAMAMQEVSPLKVMERDSEEDGMKAESTAAKEEKQLASEVAVGGAAVAM
DDQQSCEPEGACGYTKKSVFELVCGTVDMGGDTMYVVEPLSWCPHLDSVRPVPPGGMDVF
RPCEECGAEMENWICLCCYKVLCGRFVNEHMVTHSQVSGHALVLSFADLSVWCYPCESYV
HNKMLYEAKNSAHLTKFGEEIPPIN
NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt
atggattctgcctcagatcccactccacctagacctaaaaactgcactggttttccgcaa
aagccatcacacaactccaagaggcaaagcagcaaacaaagccacaagcagagtctgcag
gagaccaggaggaagggcagaatggatcggggaaaaggcgaagacgagatgaccaataag
ctcaaaaacctggatttgaaatgcaagcagaaggcaactggaacaggcgttgcttactca
gatgccttctctcgctttcactgcctgtgggacactagccactcggagtgtccagagagg
gtggtcaccatagtgaagatgatggaggaggagggactgctgtctcgctgtgtacaggtg
gagaccagagctgcatcagaggacgagctttcactggttcacacgaaggaatacattgat
cggatgaagtccacacagaagatgacagtagaagaactgaagtctgtctctgaagattat
gactctgtctacctccatcctgaatctttcacctgtgcctgtctaggagctggctccctg
ctccaactggttgacaaggtgatgacatcagaacttctgaatggcttctctgtgtgtagg
cctccgggacaccatgcccatgccgacaagatgaatggctactgtatgtttaataacctg
gcagtagcagcgcgctacgcccagaaacatcacgccgtccagcgggttctgattgtggac
tgggatgtgcatcatggccagggcatccagtacatcttccagcaggatcccagtgttctg
tatttctctgtgcatcgctatgagggtggttcattctggccacacatgccggagtctgac
agcagtgctgttggtttgggagctggacagggttacaacattaaccttccttggaagaag
ttagggatgggggatggagactacgtcacagccttccagagacttctgctacccatagcc
tacgagtttcagccgcagcttgtgttagtggccgcaggctttgattctgtggttggtgac
cccaagggagagatgtgtgtgagtccccagtgttgctctgtactcacacacatgctgatg
ggcctggctgaaggcagattggtttttgcactggagggtggctataacctgcaggccaca
gcagcaggtgcctgtgctagcttgaaggccctactaggtgacccctgccctcacctgccc
tgcccaggagcaccgagtgagagtggtctgaagtccatctctgacacagtctctgctctg
tatccattttggaccagcctgcagactctggagggaggtcctctctccgagaaagagtct
cttccttctccagtgtgtgtcgagattaaactggagtcatcatcactgggcactggtctt
gtgtatgaccagcgcatgatggagcaccacaacatgtggaatagccatcaccctgagctc
cctcagagaatctttcggatattttcctgccatgagaatttggggcttgtgacccgctgt
gagcgcataccggcccgtttggccacggaggacgaactcatgctctgccatggctcagcg
cacatagccaccataaagagcacagaacagatgaagcccagagacctgcatcggctttgt
gacgagtacaactccatctacatcagcaacgagagttacaagtgtgcactgctggctgcg
ggcgcctgcttcaactgtgcccgcgccgtcctcacgggccaggtgaggaacgccgtagcc
attgtgcgtccccctggccaccatgccgagagtgacactgcctgcggcttctgcttcttc
aacacggccgccctcaccgcccgctatgcccagagcatcacccacgaagccctgcgcgtc
ctcatcgtcgactgggatgtgcaccatggcaacggcacccagcacatcttcgagagtgac
tgcagcgttctgtacatttctctccatcgctacgagaatgccacattcttcccctcgtcg
gaggacgctaactacgataaggtaggccaggggagaggcacaggctacaatgtcaacatc
ccctggaatggagccaagatgggggaccctgaatacctggcagctttccacaacatagtg
atgcctgtagcacgagagtttgccccagagttggtactggtttcggctgggttcgatgca
gcacgaggtgaccctctgggcgggtaccaggtgaccccagaatgctacgcccacctcacc
caccagctgctgagtctagcggcaggccgggtgctcatcatcctggaggggggttacaac
ctcacctccatctctgagtccatggccatgtgcactagcatgctgctgggagacacaccc
ccactgctgccccctcttcctcctccacaccccaacgccactctcaccatcaacaacgtg
ctgagagtgcacgccccctactggagatctctcagaatacagattccagagtctctgcgt
ttgtccttgccctctctgaaacccaaaggcaagcgaccatcagcaggcaaaaagtctcct
cctcacatcacccctgaccagcggcgacagcaaagtatcccagtgatgacttctccagca
tcacccgctactgctcaggaggactctggcctagatgagctcactcagggcctgtgcttg
ctggaccttagcacatcttcctctgccaactccagccccgcctctgtgcctgtgggcggg
gcaagaccaaaggtgaagcccagcccacagagggacgccatggcgatgcaggaggtgtcg
ccactaaaagtgatggagagagacagcgaggaggatggcatgaaagctgagtccacagct
gccaaagaggagaagcagttagcgtcagaggtggctgtaggaggagctgctgttgccatg
gacgatcagcagagctgtgagccagagggagcgtgtggctacacgaagaaatctgtgttt
gagctggtgtgtggcactgtggacatgggcggggacacaatgtacgtggtggagccgctg
tcgtggtgcccccacctggactcggtgcgcccggtgccaccggggggcatggatgtgttc
cggccgtgcgaggagtgtggagccgagatggagaactggatctgcctctgctgctacaag
gtgttatgtgggcgctttgtgaacgagcacatggtgacccacagccaggtgtctggccac
gccctggtcctcagcttcgctgacctgtccgtctggtgctacccctgcgagtcctacgtc
cacaacaagatgctgtatgaagccaagaactctgctcatcttaccaagtttggggaagaa
atcccccccatcaactaa

DBGET integrated database retrieval system